Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /Xre(antitoxin)
Location 290915..292010 Replicon chromosome
Accession NZ_CP112881
Organism Sneathiella aquimaris strain 216LB-ZA1-12

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag OIR97_RS01415 Protein ID WP_169543948.1
Coordinates 290915..291664 (-) Length 250 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag OIR97_RS01420 Protein ID WP_169543949.1
Coordinates 291651..292010 (-) Length 120 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OIR97_RS01390 286063..287748 - 1686 WP_169543946.1 methyl-accepting chemotaxis protein -
OIR97_RS01395 288290..288694 - 405 WP_169543947.1 LysR family transcriptional regulator -
OIR97_RS01400 289009..289188 - 180 Protein_275 IS110 family transposase -
OIR97_RS01405 289227..289539 - 313 Protein_276 IS3 family transposase -
OIR97_RS01410 289533..290461 + 929 Protein_277 IS3 family transposase -
OIR97_RS01415 290915..291664 - 750 WP_169543948.1 RES family NAD+ phosphorylase Toxin
OIR97_RS01420 291651..292010 - 360 WP_169543949.1 MbcA/ParS/Xre antitoxin family protein Antitoxin
OIR97_RS01425 292884..294272 - 1389 Protein_280 mercury(II) reductase -
OIR97_RS01430 294311..294541 - 231 WP_169543951.1 mercury resistance system transport protein MerF -
OIR97_RS01435 294547..294831 - 285 WP_169543952.1 mercury resistance system periplasmic binding protein MerP -
OIR97_RS01440 294845..295243 - 399 WP_267177761.1 mercuric transporter MerT family protein -
OIR97_RS01445 295331..295747 + 417 WP_169543953.1 helix-turn-helix domain-containing protein -
OIR97_RS01450 296414..296896 + 483 WP_169543954.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(63-201)

Antitoxin

Antitoxin Xre/MbcA/ParS-like, toxin-binding domain

(69-117)


Sequences

Toxin        


Download         Length: 250 a.a.        Molecular weight: 28250.36 Da        Isoelectric Point: 4.9343

>T264938 WP_169543948.1 NZ_CP112881:c291664-290915 [Sneathiella aquimaris]
VERSEWKEVLSQAQPETLKGLLWRVVEGQSEIATMELVETLDEQMRLEELLDATKPSCPKTAPDDYLLATPFRYPPLKWG
SRFGAQHEMSIFYGSLLKETAAAELTYYRFVFLEGVEEEFPNPMIRASYDLFSVRFKCEHGLDLTKAPFTASTDTLQHKT
NYQPTQALGSELRAAEIQGITYQSARCPKAGLNIAIFEPAGIISKKPVQMLKCYCEATRSRVVLKLDRTQFVEFPRDLFV
IDGNLPEPA

Download         Length: 750 bp

Antitoxin


Download         Length: 120 a.a.        Molecular weight: 13086.33 Da        Isoelectric Point: 10.5257

>AT264938 WP_169543949.1 NZ_CP112881:c292010-291651 [Sneathiella aquimaris]
MALQQQAIEVDDKAILAKAAKNAASNLGIPLEELAKIIGRDRTAINRGIDPTTKTGELALLFVRCYRALHTLVGGDPKNM
KHWFGTRNKHLNGIPRELIKSVQGLNSVLIYLDGMRGKI

Download         Length: 360 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References