Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /Xre(antitoxin)
Location 290915..292010 Replicon chromosome
Accession NZ_CP112881
Organism Sneathiella aquimaris strain 216LB-ZA1-12

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag OIR97_RS01415 Protein ID WP_169543948.1
Coordinates 290915..291664 (-) Length 250 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag OIR97_RS01420 Protein ID WP_169543949.1
Coordinates 291651..292010 (-) Length 120 a.a.

Genomic Context

OIR97_RS01410OIR97_RS01445OIR97_RS01450OIR97_RS01390OIR97_RS01395OIR97_RS01400OIR97_RS01405OIR97_RS01415OIR97_RS01420OIR97_RS01425OIR97_RS01430OIR97_RS01435OIR97_RS01440
Location: 289533..290461 (929 bp)
Type: Others
Protein ID: Protein_277
Location: 295331..295747 (417 bp)
Type: Others
Protein ID: WP_169543953.1
Location: 296414..296896 (483 bp)
Type: Others
Protein ID: WP_169543954.1
Location: 286063..287748 (1686 bp)
Type: Others
Protein ID: WP_169543946.1
Location: 288290..288694 (405 bp)
Type: Others
Protein ID: WP_169543947.1
Location: 289009..289188 (180 bp)
Type: Others
Protein ID: Protein_275
Location: 289227..289539 (313 bp)
Type: Others
Protein ID: Protein_276
Location: 290915..291664 (750 bp)
Type: Toxin
Protein ID: WP_169543948.1
Location: 291651..292010 (360 bp)
Type: Antitoxin
Protein ID: WP_169543949.1
Location: 292884..294272 (1389 bp)
Type: Others
Protein ID: Protein_280
Location: 294311..294541 (231 bp)
Type: Others
Protein ID: WP_169543951.1
Location: 294547..294831 (285 bp)
Type: Others
Protein ID: WP_169543952.1
Location: 294845..295243 (399 bp)
Type: Others
Protein ID: WP_267177761.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
OIR97_RS01390286063..287748-1686WP_169543946.1methyl-accepting chemotaxis protein-
OIR97_RS01395288290..288694-405WP_169543947.1LysR family transcriptional regulator-
OIR97_RS01400289009..289188-180Protein_275IS110 family transposase-
OIR97_RS01405289227..289539-313Protein_276IS3 family transposase-
OIR97_RS01410289533..290461+929Protein_277IS3 family transposase-
OIR97_RS01415290915..291664-750WP_169543948.1RES family NAD+ phosphorylaseToxin
OIR97_RS01420291651..292010-360WP_169543949.1MbcA/ParS/Xre antitoxin family proteinAntitoxin
OIR97_RS01425292884..294272-1389Protein_280mercury(II) reductase-
OIR97_RS01430294311..294541-231WP_169543951.1mercury resistance system transport protein MerF-
OIR97_RS01435294547..294831-285WP_169543952.1mercury resistance system periplasmic binding protein MerP-
OIR97_RS01440294845..295243-399WP_267177761.1mercuric transporter MerT family protein-
OIR97_RS01445295331..295747+417WP_169543953.1helix-turn-helix domain-containing protein-
OIR97_RS01450296414..296896+483WP_169543954.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(63-201)

Antitoxin

Antitoxin Xre/MbcA/ParS-like, toxin-binding domain

(69-117)


Sequences

Toxin        


Download         Length: 250 a.a.        Molecular weight: 28250.36 Da        Isoelectric Point: 4.9343

>T264938 WP_169543948.1 NZ_CP112881:c291664-290915 [Sneathiella aquimaris]
VERSEWKEVLSQAQPETLKGLLWRVVEGQSEIATMELVETLDEQMRLEELLDATKPSCPKTAPDDYLLATPFRYPPLKWG
SRFGAQHEMSIFYGSLLKETAAAELTYYRFVFLEGVEEEFPNPMIRASYDLFSVRFKCEHGLDLTKAPFTASTDTLQHKT
NYQPTQALGSELRAAEIQGITYQSARCPKAGLNIAIFEPAGIISKKPVQMLKCYCEATRSRVVLKLDRTQFVEFPRDLFV
IDGNLPEPA

Download         Length: 750 bp

Antitoxin


Download         Length: 120 a.a.        Molecular weight: 13086.33 Da        Isoelectric Point: 10.5257

>AT264938 WP_169543949.1 NZ_CP112881:c292010-291651 [Sneathiella aquimaris]
MALQQQAIEVDDKAILAKAAKNAASNLGIPLEELAKIIGRDRTAINRGIDPTTKTGELALLFVRCYRALHTLVGGDPKNM
KHWFGTRNKHLNGIPRELIKSVQGLNSVLIYLDGMRGKI

Download         Length: 360 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References