Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 85501..86110 Replicon plasmid pPg_03
Accession NZ_CP112877
Organism Pseudanabaena galeata CCNP1313

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag OA858_RS25055 Protein ID WP_281009943.1
Coordinates 85501..85866 (-) Length 122 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag OA858_RS25060 Protein ID WP_281009944.1
Coordinates 85859..86110 (-) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OA858_RS25030 (OA858_25025) 81127..81957 - 831 WP_281009938.1 hypothetical protein -
OA858_RS25035 (OA858_25030) 82198..82587 + 390 WP_281009939.1 hypothetical protein -
OA858_RS25040 (OA858_25035) 82858..83553 + 696 WP_281009940.1 hypothetical protein -
OA858_RS25045 (OA858_25040) 83937..85352 + 1416 WP_281009941.1 tripartite tricarboxylate transporter permease -
OA858_RS25050 (OA858_25045) 85389..85511 - 123 WP_281009942.1 hypothetical protein -
OA858_RS25055 (OA858_25050) 85501..85866 - 366 WP_281009943.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OA858_RS25060 (OA858_25055) 85859..86110 - 252 WP_281009944.1 hypothetical protein Antitoxin
OA858_RS25065 (OA858_25060) 86260..86574 + 315 WP_281009945.1 hypothetical protein -
OA858_RS25070 (OA858_25065) 86584..87285 + 702 WP_281009946.1 hypothetical protein -
OA858_RS25075 (OA858_25070) 87282..89528 + 2247 WP_281009948.1 type I DNA topoisomerase -
OA858_RS25080 (OA858_25075) 89545..89919 - 375 WP_281009533.1 nuclear transport factor 2 family protein -
OA858_RS25085 (OA858_25080) 90092..90673 - 582 WP_281009534.1 Uma2 family endonuclease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - katB 1..174751 174751


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 122 a.a.        Molecular weight: 13617.52 Da        Isoelectric Point: 5.2281

>T264933 WP_281009943.1 NZ_CP112877:c85866-85501 [Pseudanabaena galeata CCNP1313]
MLSENIPISIRFADEFEENLYRLSKRFRNIRKDVVGVIEQIQAGNVVGDRIAGLGENYIVIKVRVKNSNIQKGKSAGYRL
VYQVESPTNVLLLTIYSKSDRDDISAAEILNILSSISVDDE

Download         Length: 366 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9303.43 Da        Isoelectric Point: 4.2910

>AT264933 WP_281009944.1 NZ_CP112877:c86110-85859 [Pseudanabaena galeata CCNP1313]
MRAVEATGTIDREGHLLLDQPFGEDISSRVRVIVLFSEPVQELEADPDDTPIEEVKASLKRAFQQAKAGQTRPISELWDR
IDA

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References