Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YoeB-YefM
Location 206898..207400 Replicon plasmid pPg_02
Accession NZ_CP112876
Organism Pseudanabaena galeata CCNP1313

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag OA858_RS24585 Protein ID WP_281009704.1
Coordinates 207146..207400 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name relE Uniprot ID -
Locus tag OA858_RS24580 Protein ID WP_281009703.1
Coordinates 206898..207149 (+) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OA858_RS24555 (OA858_24550) 202557..202979 - 423 WP_281009699.1 PIN domain-containing protein -
OA858_RS24560 (OA858_24555) 202979..203236 - 258 WP_281009700.1 hypothetical protein -
OA858_RS24565 (OA858_24560) 203304..204773 + 1470 WP_281009701.1 class I SAM-dependent DNA methyltransferase -
OA858_RS24570 (OA858_24565) 204773..206149 + 1377 WP_281009702.1 ATP-binding protein -
OA858_RS24575 (OA858_24570) 206223..206828 + 606 WP_281009818.1 Uma2 family endonuclease -
OA858_RS24580 (OA858_24575) 206898..207149 + 252 WP_281009703.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
OA858_RS24585 (OA858_24580) 207146..207400 + 255 WP_281009704.1 Txe/YoeB family addiction module toxin Toxin
OA858_RS24590 (OA858_24585) 207410..208651 + 1242 WP_281009705.1 restriction endonuclease subunit S -
OA858_RS24595 (OA858_24590) 208626..209645 - 1020 WP_281009375.1 IS4 family transposase -
OA858_RS24600 (OA858_24595) 209831..210298 + 468 WP_281009706.1 restriction endonuclease subunit S -
OA858_RS24605 (OA858_24600) 210324..210617 + 294 WP_281009707.1 hypothetical protein -
OA858_RS24610 (OA858_24605) 210618..210995 + 378 WP_281009708.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..216652 216652


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 10219.51 Da        Isoelectric Point: 6.4637

>T264932 WP_281009704.1 NZ_CP112876:207146-207400 [Pseudanabaena galeata CCNP1313]
VTVIFDDDAWEDYLYWQRTDPKVLKRINALIKEIQRSPYEGVGKPEPLKYNFAGYWSRRINDEHRLVYQVNDNDVLIAQL
RYHY

Download         Length: 255 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9384.75 Da        Isoelectric Point: 5.6410

>AT264932 WP_281009703.1 NZ_CP112876:206898-207149 [Pseudanabaena galeata CCNP1313]
MNAVTYTHVRNNLATMMDQVCADHTPVIVTRQNQQPVIMLSLEDYESLVETAYLLRSPKNAERLTKAIARLNAGEGQVRE
LIE

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References