Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 3381771..3382424 Replicon chromosome
Accession NZ_CP112860
Organism Acinetobacter baumannii strain EAB2

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag OPM66_RS15975 Protein ID WP_000607077.1
Coordinates 3381771..3382160 (-) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag OPM66_RS15980 Protein ID WP_001288210.1
Coordinates 3382167..3382424 (-) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OPM66_RS15960 3376889..3379084 - 2196 WP_001158906.1 TRAP transporter large permease subunit -
OPM66_RS15965 3379272..3379838 - 567 WP_000651538.1 rhombosortase -
OPM66_RS15970 3379916..3381001 - 1086 WP_000049106.1 hypothetical protein -
OPM66_RS15975 3381771..3382160 - 390 WP_000607077.1 membrane protein Toxin
OPM66_RS15980 3382167..3382424 - 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
OPM66_RS15985 3382612..3383784 + 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
OPM66_RS15990 3383833..3385323 - 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
OPM66_RS15995 3385505..3385882 - 378 WP_001216380.1 50S ribosomal protein L17 -
OPM66_RS16000 3385901..3386908 - 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T264888 WP_000607077.1 NZ_CP112860:c3382160-3381771 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT264888 WP_001288210.1 NZ_CP112860:c3382424-3382167 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References