264068

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 200989..201442 Replicon chromosome
Accession NZ_CP110644
Organism Pseudomonas sp. KU26590

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag OKW98_RS00925 Protein ID WP_265387600.1
Coordinates 200989..201258 (-) Length 90 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag OKW98_RS00930 Protein ID WP_265387601.1
Coordinates 201248..201442 (-) Length 65 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OKW98_RS00905 (OKW98_00905) 196224..197201 + 978 WP_265387596.1 NADPH:quinone oxidoreductase family protein -
OKW98_RS00910 (OKW98_00910) 197266..197763 - 498 WP_265387597.1 hypothetical protein -
OKW98_RS00915 (OKW98_00915) 197968..199305 + 1338 WP_265387598.1 acyltransferase -
OKW98_RS00920 (OKW98_00920) 199590..200939 + 1350 WP_265387599.1 glycerol-3-phosphate transporter -
OKW98_RS00925 (OKW98_00925) 200989..201258 - 270 WP_265387600.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OKW98_RS00930 (OKW98_00930) 201248..201442 - 195 WP_265387601.1 antitoxin Antitoxin
OKW98_RS00935 (OKW98_00935) 201518..202192 - 675 WP_265389616.1 gamma-glutamylcyclotransferase -
OKW98_RS00940 (OKW98_00940) 202404..203372 - 969 WP_265387602.1 CDP-6-deoxy-delta-3,4-glucoseen reductase -
OKW98_RS00945 (OKW98_00945) 203372..204838 - 1467 WP_265387603.1 4-hydroxy-3-polyprenylbenzoate decarboxylase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(3-86)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 90 a.a.        Molecular weight: 10632.14 Da        Isoelectric Point: 4.6723

>T264068 WP_265387600.1 NZ_CP110644:c201258-200989 [Pseudomonas sp. KU26590]
MIVEWRPEAVADLWEILEYIDERNPQAAEELYAEIERATSALPEHPYLYRLGRVVNTREIIVHPNYLVIYRLTDRIEILS
VLHARQQYP

Download         Length: 270 bp

Antitoxin


Download         Length: 65 a.a.        Molecular weight: 7264.10 Da        Isoelectric Point: 6.4631

>AT264068 WP_265387601.1 NZ_CP110644:c201442-201248 [Pseudomonas sp. KU26590]
MSARLSPLVSEFESEEQAARYDAWLHAKVQASVDDPRPNVAHDEVMAQLKARLAAKRDKRSDDR

Download         Length: 195 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References