Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 814130..814787 Replicon chromosome
Accession NZ_CP110638
Organism Klebsiella pneumoniae strain K201054

Toxin (Protein)


Gene name cptA Uniprot ID W8UCT0
Locus tag OO068_RS05065 Protein ID WP_002916310.1
Coordinates 814377..814787 (+) Length 137 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID W8UQ37
Locus tag OO068_RS05060 Protein ID WP_002916312.1
Coordinates 814130..814396 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OO068_RS05035 809286..810719 - 1434 WP_002916322.1 6-phospho-beta-glucosidase BglA -
OO068_RS05040 810838..811566 - 729 WP_002916321.1 MurR/RpiR family transcriptional regulator -
OO068_RS05045 811616..811927 + 312 WP_002916319.1 N(4)-acetylcytidine aminohydrolase -
OO068_RS05050 812091..812750 + 660 WP_002916317.1 hemolysin III family protein -
OO068_RS05055 812901..813884 - 984 WP_002916313.1 tRNA-modifying protein YgfZ -
OO068_RS05060 814130..814396 + 267 WP_002916312.1 FAD assembly factor SdhE Antitoxin
OO068_RS05065 814377..814787 + 411 WP_002916310.1 protein YgfX Toxin
OO068_RS05070 814794..815315 - 522 WP_002916308.1 flavodoxin FldB -
OO068_RS05075 815416..816312 + 897 WP_064153067.1 site-specific tyrosine recombinase XerD -
OO068_RS05080 816335..817048 + 714 WP_002916301.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
OO068_RS05085 817054..818787 + 1734 WP_004149758.1 single-stranded-DNA-specific exonuclease RecJ -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-132)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 137 a.a.        Molecular weight: 16049.85 Da        Isoelectric Point: 11.4778

>T264057 WP_002916310.1 NZ_CP110638:814377-814787 [Klebsiella pneumoniae]
VVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLLSLVVFDCVRSQRRIHARRGEIKLLTDSRLRWQNA
EWEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAGEWRDLRRLVLQKPAQE

Download         Length: 411 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10480.98 Da        Isoelectric Point: 5.1116

>AT264057 WP_002916312.1 NZ_CP110638:814130-814396 [Klebsiella pneumoniae]
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMNHGKPADAELQRMVTLIQTRN
RERGPVAI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GSW7

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GY41

References