Detailed information of TA system TA263958

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): /RES-TIGR02293
• Location: 4571882..4572792
• Replicon: chromosome
• Accession: NZ_CP110535
• Organism: Halomonas sp. BDJS001

Toxin (Protein)

• Gene name: -
• Uniprot ID: -
• Locus tag: OM794_RS21215
• Protein ID: WP_226246486.1
• Coordinates: 4572328..4572792 (+)
• Length: 155 a.a.

Antitoxin (Protein)

• Gene name: -
• Uniprot ID: -
• Locus tag: OM794_RS21210
• Protein ID: WP_226246487.1
• Coordinates: 4571882..4572331 (+)
• Length: 150 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• RES domain (6-149)

Antitoxin

• Antitoxin Xre-like, helix-turn-helix domain (31-90)

Sequences

Toxin

Protein

• Length: 155 a.a.
• Molecular weight: 16810.24 Da
• Isoelectric Point: 4.3640

>T263958 WP_226246486.1 NZ_CP110535:4572328-4572792 [Halomonas sp. BDJS001]
MSEVTAYRLVKRKFQETAFDGEGARLYGGRWNSPGNACVYVASTESLALLEIMVPLESYRLLNAYALLRLTLPAESILSV
GAEDLPANWREAPVPAETAELGDGWLASNQSLALAVPSVVVPRELNYMLNPAHPLFDQIIAAAEALPFQPDPRL

Nucleotide

• Length: 465 bp

Antitoxin

Protein

• Length: 150 a.a.
• Molecular weight: 16629.10 Da
• Isoelectric Point: 9.8525

>AT263958 WP_226246487.1 NZ_CP110535:4571882-4572331 [Halomonas sp. BDJS001]
MDVHFTQYQPPKALAFGFWQQIGLPARGRKLHELLHEGVEYRVYPQLAKVSGIEQKALASYVDIPPATLSRRAKSGRFKM
AESDRLYRFAELFKAALDLFEGDADGARAWLLKPNAGLGGRRPVEMSATSAEYQTVLNLIGRLEHGVSV

Nucleotide

• Length: 450 bp