Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) slvAT/RES(toxin)
Location 3163760..3164706 Replicon chromosome
Accession NZ_CP110535
Organism Halomonas sp. BDJS001

Toxin (Protein)


Gene name slvT Uniprot ID -
Locus tag OM794_RS14675 Protein ID WP_226247074.1
Coordinates 3163760..3164278 (-) Length 173 a.a.

Antitoxin (Protein)


Gene name slvA Uniprot ID -
Locus tag OM794_RS14680 Protein ID WP_226247075.1
Coordinates 3164275..3164706 (-) Length 144 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OM794_RS14645 (OM794_14645) 3159016..3159288 + 273 WP_008958942.1 XRE family transcriptional regulator -
OM794_RS14650 (OM794_14650) 3159343..3159519 - 177 WP_226247069.1 hypothetical protein -
OM794_RS14655 (OM794_14655) 3159919..3161115 - 1197 WP_226247071.1 chromate efflux transporter -
OM794_RS14660 (OM794_14660) 3161228..3162910 - 1683 WP_226247072.1 dihydroxy-acid dehydratase -
OM794_RS14665 (OM794_14665) 3163082..3163347 + 266 Protein_2871 type II toxin-antitoxin system RelE/ParE family toxin -
OM794_RS14670 (OM794_14670) 3163352..3163666 + 315 WP_226247073.1 putative addiction module antidote protein -
OM794_RS14675 (OM794_14675) 3163760..3164278 - 519 WP_226247074.1 RES domain-containing protein Toxin
OM794_RS14680 (OM794_14680) 3164275..3164706 - 432 WP_226247075.1 MbcA/ParS/Xre antitoxin family protein Antitoxin
OM794_RS14685 (OM794_14685) 3164885..3168517 + 3633 WP_226247076.1 exodeoxyribonuclease V subunit gamma -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(11-164)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 173 a.a.        Molecular weight: 19519.13 Da        Isoelectric Point: 5.6204

>T263955 WP_226247074.1 NZ_CP110535:c3164278-3163760 [Halomonas sp. BDJS001]
MIVLPELKTQAYRVHVPRWAFSPTSGAGAREHGGRLNRVGVDALYLSLEEQTALAEYKQLSALMPPGLIVSYTVSVTTII
DFRSGYNSKWDSLWQELNCDWRKYWFNQRIEPPSWLLGDMALEQGVKGILFPSLAHASGTNLVLYTETLTEYDSLEVYDP
KGDLPHNARSWQ

Download         Length: 519 bp

Antitoxin


Download         Length: 144 a.a.        Molecular weight: 15856.84 Da        Isoelectric Point: 5.6199

>AT263955 WP_226247075.1 NZ_CP110535:c3164706-3164275 [Halomonas sp. BDJS001]
MAIDTVKESLNESSGYLVPDSFERFLADLKGAAREDRHPLINPKLFASALSIDIQTLASQAHVHRTTISRAQGAEKLQRY
LRDALRVLGAAADINGDFHDALFWFRNEPLSAFDYKTPEQLVSEGRAEDLLRYVQALQAGVAG

Download         Length: 432 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References