Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/DUF1778(antitoxin)
Location 4496915..4497725 Replicon chromosome
Accession NZ_CP110523
Organism Klebsiella pneumoniae strain WS_29-2

Toxin (Protein)


Gene name KacT Uniprot ID A0A060VJ83
Locus tag OM422_RS22035 Protein ID WP_004178461.1
Coordinates 4496915..4497448 (-) Length 178 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID J2E9Q7
Locus tag OM422_RS22040 Protein ID WP_002887278.1
Coordinates 4497459..4497725 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OM422_RS22030 (4495746) 4495746..4496867 + 1122 WP_004186850.1 cupin domain-containing protein -
OM422_RS22035 (4496915) 4496915..4497448 - 534 WP_004178461.1 type II toxin-antitoxin system toxin KacT Toxin
OM422_RS22040 (4497459) 4497459..4497725 - 267 WP_002887278.1 type II toxin-antitoxin system antitoxin KacA Antitoxin
OM422_RS22045 (4497828) 4497828..4499261 - 1434 WP_004186848.1 Cu(+)/Ag(+) sensor histidine kinase -
OM422_RS22050 (4499251) 4499251..4499934 - 684 WP_002887273.1 copper response regulator transcription factor CusR -
OM422_RS22055 (4500107) 4500107..4501492 + 1386 WP_026005908.1 efflux transporter outer membrane subunit -
OM422_RS22060 (4501510) 4501510..4501854 + 345 WP_004894569.1 cation efflux system protein CusF -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(91-151)

Antitoxin

Vibrio phage ICP1, Orf50

(2-86)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19810.65 Da        Isoelectric Point: 5.2614

>T263902 WP_004178461.1 NZ_CP110523:c4497448-4496915 [Klebsiella pneumoniae]
MEQQLTIEMIADAFSYDITGFDCGEEALNTFLKEHLKRQHDGQILRGYALVSGDTVPRLLGYYTLSGSCFERGMLPSKTQ
QKKIPYQNAPSVTLGRLAIDKSVQGQGWGEMLVAHAMRVVWGASKAVGIYGLFVEALNEKAKAFYLRLGFIQLVDENSNL
LFYPTKSIEQLFTDDES

Download         Length: 534 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9996.46 Da        Isoelectric Point: 10.1757

>AT263902 WP_002887278.1 NZ_CP110523:c4497725-4497459 [Klebsiella pneumoniae]
MPALKKQRIDLRLTDDDKSIIEEAAAISNQTITQFVVASASERAAEVIEQHRRMVLNEQSWSLVMEAITQPPAPNDRLKR
AAKRLQTR

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A060VJ83

Antitoxin

Source ID Structure
PDB 5ZGN
AlphaFold DB A0A0H3GLZ1

References