Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | BrnTA/BrnT-BrnA |
Location | 962175..962734 | Replicon | chromosome |
Accession | NC_017246 | ||
Organism | Brucella melitensis M5-90 |
Toxin (Protein)
Gene name | brnT | Uniprot ID | A0A7U8PD14 |
Locus tag | BM590_RS04695 | Protein ID | WP_002966807.1 |
Coordinates | 962489..962734 (-) | Length | 82 a.a. |
Antitoxin (Protein)
Gene name | brnA | Uniprot ID | C0RIV1 |
Locus tag | BM590_RS04690 | Protein ID | WP_004683740.1 |
Coordinates | 962175..962489 (-) | Length | 105 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BM590_RS04645 | 957880..958083 | - | 204 | WP_004683737.1 | hypothetical protein | - |
BM590_RS04650 | 958086..958301 | - | 216 | WP_005968947.1 | hypothetical protein | - |
BM590_RS04655 | 958298..958501 | - | 204 | WP_002964088.1 | hypothetical protein | - |
BM590_RS04660 | 958551..959255 | + | 705 | WP_005968944.1 | hypothetical protein | - |
BM590_RS04665 | 959252..959482 | + | 231 | WP_002964091.1 | hypothetical protein | - |
BM590_RS04670 | 959479..959754 | + | 276 | WP_002964092.1 | hypothetical protein | - |
BM590_RS04675 | 959777..960253 | + | 477 | WP_002966806.1 | hypothetical protein | - |
BM590_RS04680 | 960599..961309 | + | 711 | WP_004683739.1 | porin family protein | - |
BM590_RS04685 | 961657..961827 | - | 171 | WP_002964095.1 | DUF1508 domain-containing protein | - |
BM590_RS04690 | 962175..962489 | - | 315 | WP_004683740.1 | BrnA antitoxin family protein | Antitoxin |
BM590_RS04695 | 962489..962734 | - | 246 | WP_002966807.1 | BrnT family toxin | Toxin |
BM590_RS04700 | 962867..963505 | + | 639 | Protein_923 | tRNA-guanine transglycosylase | - |
BM590_RS17625 | 963575..964329 | + | 755 | Protein_924 | IS5 family transposase | - |
BM590_RS04710 | 964333..965025 | + | 693 | WP_006135935.1 | hypothetical protein | - |
BM590_RS04715 | 965437..966888 | + | 1452 | WP_006135932.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Genomic island | - | wboA / wbdA | 956868..970204 | 13336 | |
- | flank | IS/Tn | - | - | 963575..963943 | 368 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 82 a.a. Molecular weight: 9162.82 Da Isoelectric Point: 10.3158
>T26387 WP_002966807.1 NC_017246:c962734-962489 [Brucella melitensis M5-90]
MKIIWDEPKRQTNIAKHGLDFADLHFEFFLSAKVFPTKADRLMAIGEFNGLIIIAVIFKPVGSEALSVISMRSASQKERK
L
MKIIWDEPKRQTNIAKHGLDFADLHFEFFLSAKVFPTKADRLMAIGEFNGLIIIAVIFKPVGSEALSVISMRSASQKERK
L
Download Length: 246 bp
>T26387 NC_017246:c962734-962489 [Brucella melitensis M5-90]
ATGAAGATCATCTGGGACGAACCGAAGCGACAGACCAACATTGCCAAGCACGGCTTGGACTTCGCTGACCTGCATTTCGA
ATTCTTCCTGTCGGCTAAGGTCTTCCCCACCAAGGCAGATCGCCTGATGGCAATCGGAGAATTCAACGGCCTGATTATCA
TCGCCGTCATTTTCAAGCCGGTTGGTTCGGAAGCCCTCTCCGTGATCTCCATGCGTTCAGCAAGCCAGAAGGAAAGGAAG
CTCTGA
ATGAAGATCATCTGGGACGAACCGAAGCGACAGACCAACATTGCCAAGCACGGCTTGGACTTCGCTGACCTGCATTTCGA
ATTCTTCCTGTCGGCTAAGGTCTTCCCCACCAAGGCAGATCGCCTGATGGCAATCGGAGAATTCAACGGCCTGATTATCA
TCGCCGTCATTTTCAAGCCGGTTGGTTCGGAAGCCCTCTCCGTGATCTCCATGCGTTCAGCAAGCCAGAAGGAAAGGAAG
CTCTGA
Antitoxin
Download Length: 105 a.a. Molecular weight: 11653.48 Da Isoelectric Point: 10.5824
>AT26387 WP_004683740.1 NC_017246:c962489-962175 [Brucella melitensis M5-90]
MGIKFSSKRPLTQEEEAEIQKMIASDPDAPEATDKQLAKAKPFKESFPDMAAKMEKAIRGRPRIDNPKTPVTIRLDQDVV
QRFKATGKGWQGRMNDALRKAVGL
MGIKFSSKRPLTQEEEAEIQKMIASDPDAPEATDKQLAKAKPFKESFPDMAAKMEKAIRGRPRIDNPKTPVTIRLDQDVV
QRFKATGKGWQGRMNDALRKAVGL
Download Length: 315 bp
>AT26387 NC_017246:c962489-962175 [Brucella melitensis M5-90]
ATGGGTATCAAATTTTCCTCTAAGCGCCCTCTCACTCAGGAGGAAGAGGCAGAAATTCAGAAGATGATCGCAAGCGATCC
CGATGCACCGGAAGCCACCGATAAACAGCTTGCCAAGGCCAAGCCTTTCAAGGAATCCTTTCCAGATATGGCCGCCAAGA
TGGAGAAGGCCATTCGAGGCCGGCCGCGCATCGACAATCCCAAGACGCCGGTTACTATCCGGCTCGATCAGGATGTAGTT
CAACGCTTCAAGGCCACCGGCAAAGGCTGGCAGGGCCGTATGAACGATGCCCTGCGCAAAGCTGTCGGGCTTTGA
ATGGGTATCAAATTTTCCTCTAAGCGCCCTCTCACTCAGGAGGAAGAGGCAGAAATTCAGAAGATGATCGCAAGCGATCC
CGATGCACCGGAAGCCACCGATAAACAGCTTGCCAAGGCCAAGCCTTTCAAGGAATCCTTTCCAGATATGGCCGCCAAGA
TGGAGAAGGCCATTCGAGGCCGGCCGCGCATCGACAATCCCAAGACGCCGGTTACTATCCGGCTCGATCAGGATGTAGTT
CAACGCTTCAAGGCCACCGGCAAAGGCTGGCAGGGCCGTATGAACGATGCCCTGCGCAAAGCTGTCGGGCTTTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A7U8PD14 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | C0RIV1 |