263587

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4610718..4611079 Replicon chromosome
Accession NZ_CP110296
Organism Xanthomonas citri pv. fuscans strain LNPV 30.30

Toxin (Protein)


Gene name EcnB Uniprot ID M4UGA1
Locus tag OM946_RS20030 Protein ID WP_005914328.1
Coordinates 4610718..4610852 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID H8FG64
Locus tag OM946_RS20035 Protein ID WP_003486606.1
Coordinates 4610927..4611079 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OM946_RS20015 (OM946_20015) 4607747..4608790 - 1044 WP_099802478.1 MBL fold metallo-hydrolase -
OM946_RS20020 (OM946_20020) 4608820..4610109 - 1290 WP_007966942.1 tryptophan--tRNA ligase -
OM946_RS20025 (OM946_20025) 4610282..4610491 - 210 WP_016904514.1 CsbD family protein -
OM946_RS20030 (OM946_20030) 4610718..4610852 - 135 WP_005914328.1 entericidin A/B family lipoprotein Toxin
OM946_RS20035 (OM946_20035) 4610927..4611079 - 153 WP_003486606.1 entericidin A/B family lipoprotein Antitoxin
OM946_RS20040 (OM946_20040) 4611186..4612109 - 924 WP_007966941.1 arginase -
OM946_RS20045 (OM946_20045) 4612430..4612882 + 453 WP_007974175.1 roadblock/LC7 domain-containing protein -
OM946_RS20050 (OM946_20050) 4612946..4613305 + 360 WP_003486613.1 hypothetical protein -
OM946_RS20055 (OM946_20055) 4613402..4614319 + 918 WP_007966939.1 hypothetical protein -
OM946_RS20060 (OM946_20060) 4614316..4614858 + 543 WP_003486615.1 GTPase -
OM946_RS20065 (OM946_20065) 4615342..4616025 + 684 WP_007966938.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4459.32 Da        Isoelectric Point: 9.3487

>T263587 WP_005914328.1 NZ_CP110296:c4610852-4610718 [Xanthomonas citri pv. fuscans]
MKRAIVLLVLSMLSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5122.07 Da        Isoelectric Point: 8.7942

>AT263587 WP_003486606.1 NZ_CP110296:c4611079-4610927 [Xanthomonas citri pv. fuscans]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDMQGAGNKVEKTAEKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A3G2W7U6

Antitoxin

Source ID Structure
AlphaFold DB A0A828YLX6

References