Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RelE(toxin) |
Location | 2199228..2199712 | Replicon | chromosome |
Accession | NZ_CP110231 | ||
Organism | Selenomonas sputigena strain KCOM 20461 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | OL240_RS09995 | Protein ID | WP_264918213.1 |
Coordinates | 2199228..2199494 (-) | Length | 89 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | F4EX28 |
Locus tag | OL240_RS10000 | Protein ID | WP_013741006.1 |
Coordinates | 2199491..2199712 (-) | Length | 74 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OL240_RS09970 (OL240_09970) | 2194471..2195031 | - | 561 | WP_264918206.1 | hypothetical protein | - |
OL240_RS09975 (OL240_09975) | 2195457..2195837 | - | 381 | WP_232362398.1 | metalloregulator ArsR/SmtB family transcription factor | - |
OL240_RS09980 (OL240_09980) | 2195856..2196167 | - | 312 | WP_264918208.1 | hypothetical protein | - |
OL240_RS09985 (OL240_09985) | 2196201..2198138 | - | 1938 | WP_264918210.1 | fructose-specific PTS transporter subunit EIIC | - |
OL240_RS09990 (OL240_09990) | 2198168..2199076 | - | 909 | WP_264918212.1 | 1-phosphofructokinase | - |
OL240_RS09995 (OL240_09995) | 2199228..2199494 | - | 267 | WP_264918213.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
OL240_RS10000 (OL240_10000) | 2199491..2199712 | - | 222 | WP_013741006.1 | DUF6290 family protein | Antitoxin |
OL240_RS10005 (OL240_10005) | 2200113..2200664 | + | 552 | WP_264918216.1 | hypothetical protein | - |
OL240_RS10010 (OL240_10010) | 2200739..2201623 | + | 885 | WP_264918218.1 | Hsp33 family molecular chaperone HslO | - |
OL240_RS10015 (OL240_10015) | 2202052..2204712 | + | 2661 | WP_264918220.1 | valine--tRNA ligase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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