Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 4273176..4273692 Replicon chromosome
Accession NZ_CP110145
Organism Klebsiella pneumoniae strain YZ22CK024

Toxin (Protein)


Gene name relE Uniprot ID A0A2A2BGN7
Locus tag OMD35_RS20930 Protein ID WP_009486548.1
Coordinates 4273176..4273460 (-) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID R4Y888
Locus tag OMD35_RS20935 Protein ID WP_002886901.1
Coordinates 4273450..4273692 (-) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OMD35_RS20905 4268593..4268901 - 309 WP_012737232.1 PTS sugar transporter subunit IIB -
OMD35_RS20910 4268986..4269159 + 174 WP_032433782.1 hypothetical protein -
OMD35_RS20915 4269162..4269905 + 744 WP_002886905.1 MurR/RpiR family transcriptional regulator -
OMD35_RS20920 4270262..4272400 + 2139 WP_004186701.1 anaerobic ribonucleoside-triphosphate reductase -
OMD35_RS20925 4272708..4273172 + 465 WP_002886903.1 anaerobic ribonucleoside-triphosphate reductase-activating protein -
OMD35_RS20930 4273176..4273460 - 285 WP_009486548.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OMD35_RS20935 4273450..4273692 - 243 WP_002886901.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
OMD35_RS20940 4273770..4275680 - 1911 WP_009486549.1 PRD domain-containing protein -
OMD35_RS20945 4275703..4276857 - 1155 WP_002886900.1 lactonase family protein -
OMD35_RS20950 4276924..4277664 - 741 WP_009486551.1 KDGP aldolase family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-83)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-80)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 11125.95 Da        Isoelectric Point: 10.4951

>T263232 WP_009486548.1 NZ_CP110145:c4273460-4273176 [Klebsiella pneumoniae]
MTYELEFDPRARREWQKPGETVKKQFKNKLQQIVQNPRIESTRLSDLPDCYKIKLKASGYRLVYQVRDSVVVVYVIAIGK
REKAAVYHQANKRL

Download         Length: 285 bp

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9045.55 Da        Isoelectric Point: 6.3340

>AT263232 WP_002886901.1 NZ_CP110145:c4273692-4273450 [Klebsiella pneumoniae]
MATLNVRLDDKLKKEAYAVLEKLDMTPTEAVRLLFQYIAENGRMPVKSMTISDGEAALLRTVRERLENPRPGVKVSLDDL

Download         Length: 243 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2A2BGN7

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GLP0

References