Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-YafN
Location 89714..90242 Replicon plasmid pCadTS8_2
Accession NZ_CP109967
Organism Catenovulum sp. TS8

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag OLW01_RS16390 Protein ID WP_268077046.1
Coordinates 89714..90001 (-) Length 96 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag OLW01_RS16395 Protein ID WP_268077048.1
Coordinates 89991..90242 (-) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OLW01_RS16375 (OLW01_16375) 85348..86901 + 1554 WP_268077040.1 tryptophan 7-halogenase -
OLW01_RS16380 (OLW01_16380) 86970..87677 + 708 WP_268077042.1 SapC family protein -
OLW01_RS16385 (OLW01_16385) 87775..88566 + 792 WP_268077044.1 IclR family transcriptional regulator -
OLW01_RS16390 (OLW01_16390) 89714..90001 - 288 WP_268077046.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OLW01_RS16395 (OLW01_16395) 89991..90242 - 252 WP_268077048.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
OLW01_RS16400 (OLW01_16400) 91349..92218 - 870 WP_268077050.1 sugar phosphate isomerase/epimerase -
OLW01_RS16405 (OLW01_16405) 92396..92896 - 501 WP_268077052.1 lactoylglutathione lyase family protein -
OLW01_RS16410 (OLW01_16410) 92991..93863 + 873 WP_268077054.1 LysR family transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..646854 646854


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-83)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(11-63)


Sequences

Toxin        


Download         Length: 96 a.a.        Molecular weight: 10972.01 Da        Isoelectric Point: 10.4655

>T262573 WP_268077046.1 NZ_CP109967:c90001-89714 [Catenovulum sp. TS8]
MTYKLKFLPAAKKEWDKLADPLKTQFKKKLAERLENPHVPSAKLSGYESVYKIKLRTAGYRLAYEVIDNEVVIYVLAVGK
RDKNAIYKKLASRLV

Download         Length: 288 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9187.38 Da        Isoelectric Point: 4.1958

>AT262573 WP_268077048.1 NZ_CP109967:c90242-89991 [Catenovulum sp. TS8]
MRQVLADCSASISELKKNPTALLNEADGSAIAILNHNKPAAYLVPAETYEWLMDVVDDYELAKVVEDRRRNLSGAIEVNL
DDL

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References