Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) sdenTA/AbiEii(toxin)
Location 2611747..2613176 Replicon chromosome
Accession NZ_CP109965
Organism Catenovulum sp. TS8

Toxin (Protein)


Gene name sdenT Uniprot ID -
Locus tag OLW01_RS11430 Protein ID WP_268074044.1
Coordinates 2611747..2612637 (-) Length 297 a.a.

Antitoxin (Protein)


Gene name sdenA Uniprot ID -
Locus tag OLW01_RS11435 Protein ID WP_268074045.1
Coordinates 2612652..2613176 (-) Length 175 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OLW01_RS11410 (OLW01_11410) 2607401..2607889 - 489 WP_268074040.1 hypothetical protein -
OLW01_RS11415 (OLW01_11415) 2607886..2608587 - 702 WP_268074041.1 DUF3800 domain-containing protein -
OLW01_RS11420 (OLW01_11420) 2608600..2610420 - 1821 WP_268074042.1 restriction endonuclease subunit S -
OLW01_RS11425 (OLW01_11425) 2610420..2611667 - 1248 WP_268074043.1 N-6 DNA methylase -
OLW01_RS11430 (OLW01_11430) 2611747..2612637 - 891 WP_268074044.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
OLW01_RS11435 (OLW01_11435) 2612652..2613176 - 525 WP_268074045.1 hypothetical protein Antitoxin
OLW01_RS11440 (OLW01_11440) 2614443..2615795 + 1353 WP_268074046.1 HipA domain-containing protein -
OLW01_RS11445 (OLW01_11445) 2615792..2616067 + 276 WP_268074047.1 helix-turn-helix transcriptional regulator -
OLW01_RS11450 (OLW01_11450) 2616554..2616775 + 222 WP_268074048.1 hypothetical protein -
OLW01_RS11455 (OLW01_11455) 2616762..2617043 + 282 WP_268074049.1 type II toxin-antitoxin system RelE/ParE family toxin -
OLW01_RS11460 (OLW01_11460) 2617162..2618097 - 936 WP_268074050.1 formate/nitrite transporter family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 2575311..2619590 44279


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(39-269)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 297 a.a.        Molecular weight: 34331.44 Da        Isoelectric Point: 6.9761

>T262569 WP_268074044.1 NZ_CP109965:c2612637-2611747 [Catenovulum sp. TS8]
MLKQQIRQIIQANPEYAAITPVIEKEILHHDIMNVLIKQGAMQTLSFIGGTSLRMCYNSARLSEDLDFNGGHDFKPSDFD
GLEIEIQKYIQKKYETDVWVNKPAEDNQGNTASWKISIEKEANRPDLPRQKMHIDVCAIPSFDIEKRPLLNHYNIVVPTE
GILVPVQSLQEILADKLIALAYRSRRIKPRDIWDIVWIKQRGMSLSRELVEKKLAARNKPLDDFRQALSTQLNKLMQNTE
VKDDFNMEMSRFIPQKIKERTLDNPEYWAYVQAEVNEIASALLRDNASRNKFDMGF

Download         Length: 891 bp

Antitoxin


Download         Length: 175 a.a.        Molecular weight: 19438.57 Da        Isoelectric Point: 9.7400

>AT262569 WP_268074045.1 NZ_CP109965:c2613176-2612652 [Catenovulum sp. TS8]
MTKTDKLLSVFASSVKTGGGIHTASELAFMLGEPCNTAFLKLLADGVKKEKFRRVAKGLYESTLTPPEPESAIYKIITKL
RSNVLNYISLESQLSHTGDISQVVMDRLTVITKGRSGTFATPYGLIEFTHTKKTIEQIAPNLYFDPDIKMYRATTKQAIE
DLKHCNRNLHMLNL

Download         Length: 525 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References