Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 308974..309500 Replicon plasmid pESL4.1
Accession NZ_CP109854
Organism Pantoea dispersa strain ESL4

Toxin (Protein)


Gene name relE Uniprot ID A0A8E1S2F7
Locus tag OH655_RS20535 Protein ID WP_021509424.1
Coordinates 308974..309261 (-) Length 96 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A8E1S2J3
Locus tag OH655_RS20540 Protein ID WP_058759167.1
Coordinates 309261..309500 (-) Length 80 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH655_RS20520 (OH655_20520) 304876..305658 - 783 WP_238562326.1 acetolactate decarboxylase -
OH655_RS20525 (OH655_20525) 305763..306644 + 882 WP_264444670.1 LysR family transcriptional regulator -
OH655_RS20530 (OH655_20530) 307074..308855 + 1782 WP_264444672.1 sensor domain-containing phosphodiesterase -
OH655_RS20535 (OH655_20535) 308974..309261 - 288 WP_021509424.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OH655_RS20540 (OH655_20540) 309261..309500 - 240 WP_058759167.1 type II toxin-antitoxin system antitoxin RelB Antitoxin
OH655_RS20545 (OH655_20545) 309627..312329 - 2703 WP_264444675.1 HTH-type transcriptional regulator MalT -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - iroN 1..690879 690879


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(5-86)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-78)


Sequences

Toxin        


Download         Length: 96 a.a.        Molecular weight: 11192.19 Da        Isoelectric Point: 10.1967

>T262227 WP_021509424.1 NZ_CP109854:c309261-308974 [Pantoea dispersa]
MAYFLDFDERALKEWRKLGSTVREQLKKKLAEVLEAPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGK
RERAEVYNEAVKRIL

Download         Length: 288 bp

Antitoxin


Download         Length: 80 a.a.        Molecular weight: 9071.48 Da        Isoelectric Point: 4.5230

>AT262227 WP_058759167.1 NZ_CP109854:c309500-309261 [Pantoea dispersa]
MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIAENERLPFKQTLLSDEDAELVEIVKERLRNPKPVRVTLDDL

Download         Length: 240 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References