Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-YafN |
| Location | 279817..280352 | Replicon | plasmid pESL4.1 |
| Accession | NZ_CP109854 | ||
| Organism | Pantoea dispersa strain ESL4 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | A0A246NE43 |
| Locus tag | OH655_RS20405 | Protein ID | WP_058770149.1 |
| Coordinates | 279817..280104 (-) | Length | 96 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | - |
| Locus tag | OH655_RS20410 | Protein ID | WP_058770150.1 |
| Coordinates | 280101..280352 (-) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OH655_RS20385 (OH655_20385) | 275563..276534 | + | 972 | WP_058758760.1 | autoinducer 2 ABC transporter substrate-binding protein | - |
| OH655_RS20390 (OH655_20390) | 276546..277487 | + | 942 | WP_264444630.1 | ABC transporter permease | - |
| OH655_RS20395 (OH655_20395) | 277484..278428 | + | 945 | WP_021509450.1 | ABC transporter permease | - |
| OH655_RS20400 (OH655_20400) | 278432..279766 | + | 1335 | WP_058758757.1 | ArgE/DapE family deacylase | - |
| OH655_RS20405 (OH655_20405) | 279817..280104 | - | 288 | WP_058770149.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| OH655_RS20410 (OH655_20410) | 280101..280352 | - | 252 | WP_058770150.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| OH655_RS20415 (OH655_20415) | 280484..282673 | - | 2190 | WP_264444635.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| OH655_RS20420 (OH655_20420) | 282670..283626 | - | 957 | WP_264444637.1 | xanthine dehydrogenase family protein subunit M | - |
| OH655_RS20425 (OH655_20425) | 283623..284243 | - | 621 | WP_104187284.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | iroN | 1..690879 | 690879 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|