261966

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) FicTA/Fic(toxin)
Location 11987..12878 Replicon plasmid unnamed
Accession NZ_CP109655
Organism Campylobacter coli strain 10-02932

Toxin (Protein)


Gene name Fic Uniprot ID -
Locus tag OKF33_RS09055 Protein ID WP_057039918.1
Coordinates 11987..12640 (-) Length 218 a.a.

Antitoxin (Protein)


Gene name Fti Uniprot ID -
Locus tag OKF33_RS09060 Protein ID WP_072225153.1
Coordinates 12624..12878 (-) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OKF33_RS09025 7292..7675 + 384 WP_002797386.1 DNA transfer protein -
OKF33_RS09030 7638..9794 + 2157 WP_023361569.1 relaxase/mobilization nuclease domain-containing protein -
OKF33_RS09035 10035..10274 - 240 WP_070312165.1 hypothetical protein -
OKF33_RS09040 10277..10963 - 687 WP_002791558.1 AAA family ATPase -
OKF33_RS09045 11055..11450 - 396 WP_264306154.1 conjugal transfer protein TraM -
OKF33_RS09050 11515..11982 - 468 WP_057039919.1 signal peptidase I -
OKF33_RS09055 11987..12640 - 654 WP_057039918.1 Fic family protein Toxin
OKF33_RS09060 12624..12878 - 255 WP_072225153.1 hypothetical protein Antitoxin
OKF33_RS09065 12972..13691 - 720 WP_264306155.1 conjugal transfer protein TraL -
OKF33_RS09070 13702..15525 - 1824 WP_057031751.1 type IV secretory system conjugative DNA transfer family protein -
OKF33_RS09075 15522..17735 - 2214 WP_002790336.1 zincin-like metallopeptidase domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..26047 26047


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Fido domain

(50-159)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 218 a.a.        Molecular weight: 25109.68 Da        Isoelectric Point: 10.0342

>T261966 WP_057039918.1 NZ_CP109655:c12640-11987 [Campylobacter coli]
MKENNEELFKRLITDNKLGIKDEKLFDKESRFYTGLRERELTLNPIKGNFDYQHLKNIHKHIFQDVFHWAGKDRMEVGLH
GNFGKYAPNGTITNFVPGKDLNATAQQIFTWLKEDNYLKNSKDLNDFAKNLAEFARNLNALHPFREGNGRTQRIFLNELA
KNAGYKLDLNLIPKDKTIMASVEASQLKLGKLEAIIKTNLKSFRQNLDLEQNKGISL

Download         Length: 654 bp

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 9811.25 Da        Isoelectric Point: 5.1890

>AT261966 WP_072225153.1 NZ_CP109655:c12878-12624 [Campylobacter coli]
MQKQYPEVHSLEESLAILKKYKDDVNKEDYEGIKSVISNHAIESIYMNELDIIAMIKQSALKLSADEIIAEYKKKGFVEY
ERKQ

Download         Length: 255 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References