261812

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4661467..4661830 Replicon chromosome
Accession NZ_CP107717
Organism Xanthomonas campestris pv. campestris strain XY1-1

Toxin (Protein)


Gene name EcnB Uniprot ID G0CKD4
Locus tag OF401_RS20265 Protein ID WP_011270059.1
Coordinates 4661467..4661601 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID Q8P3Z2
Locus tag OF401_RS20270 Protein ID WP_011038999.1
Coordinates 4661678..4661830 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OF401_RS20245 (OF401_20245) 4656731..4658383 - 1653 WP_057673525.1 M28 family metallopeptidase -
OF401_RS20250 (OF401_20250) 4658548..4659492 - 945 WP_057673527.1 MBL fold metallo-hydrolase -
OF401_RS20255 (OF401_20255) 4659576..4660865 - 1290 WP_057673596.1 tryptophan--tRNA ligase -
OF401_RS20260 (OF401_20260) 4661025..4661234 - 210 WP_011038998.1 CsbD family protein -
OF401_RS20265 (OF401_20265) 4661467..4661601 - 135 WP_011270059.1 entericidin A/B family lipoprotein Toxin
OF401_RS20270 (OF401_20270) 4661678..4661830 - 153 WP_011038999.1 entericidin A/B family lipoprotein Antitoxin
OF401_RS20275 (OF401_20275) 4661941..4662864 - 924 WP_057673597.1 arginase -
OF401_RS20280 (OF401_20280) 4663178..4663639 + 462 WP_057673529.1 roadblock/LC7 domain-containing protein -
OF401_RS20285 (OF401_20285) 4663722..4664081 + 360 WP_011039002.1 hypothetical protein -
OF401_RS20290 (OF401_20290) 4664184..4665101 + 918 WP_057673531.1 hypothetical protein -
OF401_RS20295 (OF401_20295) 4665098..4665640 + 543 WP_057673534.1 GTPase -
OF401_RS20300 (OF401_20300) 4665976..4666659 + 684 WP_050911792.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4431.27 Da        Isoelectric Point: 9.3487

>T261812 WP_011270059.1 NZ_CP107717:c4661601-4661467 [Xanthomonas campestris pv. campestris]
MKRAIALLVLSMLSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5173.15 Da        Isoelectric Point: 8.2782

>AT261812 WP_011038999.1 NZ_CP107717:c4661830-4661678 [Xanthomonas campestris pv. campestris]
MKRLLTLMVLGLFSAGMMTGCNTMAGAGKDMQGAGDKVEKTADKCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H2XDQ0

Antitoxin

Source ID Structure
AlphaFold DB Q8P3Z2

References