Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | pasABC/RelE-HTH |
Location | 2084..2558 | Replicon | plasmid unnamed4 |
Accession | NZ_CP107487 | ||
Organism | Klebsiella pneumoniae strain CRKP_8 |
Toxin (Protein)
Gene name | pasB | Uniprot ID | A0A8J3DT22 |
Locus tag | OH502_RS29215 | Protein ID | WP_004197762.1 |
Coordinates | 2292..2558 (+) | Length | 89 a.a. |
Antitoxin (Protein)
Gene name | pasA | Uniprot ID | S1EJF5 |
Locus tag | OH502_RS29210 | Protein ID | WP_000879771.1 |
Coordinates | 2084..2308 (+) | Length | 75 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OH502_RS29195 | 220..654 | + | 435 | Protein_1 | relaxase/mobilization nuclease domain-containing protein | - |
OH502_RS29200 | 689..1198 | + | 510 | WP_032433972.1 | MbeB family mobilization protein | - |
OH502_RS29205 | 1205..1417 | + | 213 | WP_021527181.1 | MbeD family mobilization/exclusion protein | - |
OH502_RS29210 | 2084..2308 | + | 225 | WP_000879771.1 | DUF6290 family protein | Antitoxin |
OH502_RS29215 | 2292..2558 | + | 267 | WP_004197762.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
OH502_RS29220 | 2628..2978 | - | 351 | WP_004197756.1 | hypothetical protein | - |
OH502_RS29225 | 3044..3589 | - | 546 | WP_023317533.1 | hypothetical protein | - |
OH502_RS29230 | 3615..3941 | - | 327 | WP_050516389.1 | hypothetical protein | - |
OH502_RS29235 | 5097..5273 | + | 177 | WP_004197757.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Mobilizable plasmid | - | - | 1..5596 | 5596 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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