261118

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/Cpta(toxin)
Location 3610809..3611463 Replicon chromosome
Accession NZ_CP107403
Organism Klebsiella pneumoniae strain CRKP_25

Toxin (Protein)


Gene name cptA Uniprot ID R4YHX2
Locus tag OH516_RS17845 Protein ID WP_004144731.1
Coordinates 3611056..3611463 (+) Length 136 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID W8UQ37
Locus tag OH516_RS17840 Protein ID WP_002916312.1
Coordinates 3610809..3611075 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH516_RS17815 3605965..3607398 - 1434 WP_002916322.1 6-phospho-beta-glucosidase BglA -
OH516_RS17820 3607517..3608245 - 729 WP_002916321.1 MurR/RpiR family transcriptional regulator -
OH516_RS17825 3608295..3608606 + 312 WP_002916319.1 N(4)-acetylcytidine aminohydrolase -
OH516_RS17830 3608770..3609429 + 660 WP_002916317.1 hemolysin III family protein -
OH516_RS17835 3609580..3610563 - 984 WP_002916313.1 tRNA-modifying protein YgfZ -
OH516_RS17840 3610809..3611075 + 267 WP_002916312.1 FAD assembly factor SdhE Antitoxin
OH516_RS17845 3611056..3611463 + 408 WP_004144731.1 protein YgfX Toxin
OH516_RS17850 3611470..3611991 - 522 WP_002916308.1 flavodoxin FldB -
OH516_RS17855 3612092..3612988 + 897 WP_004144729.1 site-specific tyrosine recombinase XerD -
OH516_RS17860 3613011..3613724 + 714 WP_002916301.1 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -
OH516_RS17865 3613730..3615463 + 1734 WP_004151783.1 single-stranded-DNA-specific exonuclease RecJ -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Inner membrane protein YgfX

(3-131)

Antitoxin

Flavinator of succinate dehydrogenase

(7-79)


Sequences

Toxin        


Download         Length: 136 a.a.        Molecular weight: 15936.69 Da        Isoelectric Point: 11.4778

>T261118 WP_004144731.1 NZ_CP107403:3611056-3611463 [Klebsiella pneumoniae]
VVLWQSDLRISWRAQWFSLLLHGVVAALVLLVPWPLSYTPIWLLLSLVVFDCVRSQRRIHARRGEIKLLTDSRLRWQNAE
WEILGTPWVINSGMLLRLRHVDTRRGQHLWLAADSMDAGEWRDLRRLVLQKPAQE

Download         Length: 408 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 10480.98 Da        Isoelectric Point: 5.1116

>AT261118 WP_002916312.1 NZ_CP107403:3610809-3611075 [Klebsiella pneumoniae]
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDADKQLFIRLLENDDPDLFNWLMNHGKPADAELQRMVTLIQTRN
RERGPVAI

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A378E4P6

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GY41

References