Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 5430732..5432320 Replicon chromosome
Accession NZ_CP107394
Organism Klebsiella pneumoniae strain CRKP_27

Toxin (Protein)


Gene name hipA Uniprot ID A0A0H3GN97
Locus tag OH529_RS26770 Protein ID WP_004199851.1
Coordinates 5430998..5432320 (+) Length 441 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID A0A0H3GXD8
Locus tag OH529_RS26765 Protein ID WP_002904790.1
Coordinates 5430732..5430998 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH529_RS26740 5425882..5426805 + 924 WP_004199849.1 LysR family hpxDE operon transcriptional regulator HpxR -
OH529_RS26745 5426786..5427940 - 1155 WP_002904783.1 FAD-dependent urate hydroxylase HpxO -
OH529_RS26750 5428286..5429665 + 1380 WP_004199850.1 nucleobase:cation symporter-2 family protein -
OH529_RS26755 5429643..5430143 + 501 WP_002904787.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
OH529_RS26760 5430140..5430466 + 327 WP_002904788.1 hydroxyisourate hydrolase -
OH529_RS26765 5430732..5430998 + 267 WP_002904790.1 type II toxin-antitoxin system antitoxin HipB Antitoxin
OH529_RS26770 5430998..5432320 + 1323 WP_004199851.1 type II toxin-antitoxin system HipA family toxin Toxin
OH529_RS26775 5432337..5433629 - 1293 WP_002904794.1 glycoside hydrolase family 10 protein -
OH529_RS26780 5433762..5434766 - 1005 WP_004199852.1 fimbrial protein -
OH529_RS26785 5434754..5437255 - 2502 WP_004199853.1 fimbria/pilus outer membrane usher protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(149-402)

Antitoxin

Cro/C1-type helix-turn-helix domain

(16-65)


Sequences

Toxin        


Download         Length: 441 a.a.        Molecular weight: 49128.44 Da        Isoelectric Point: 7.2487

>T261074 WP_004199851.1 NZ_CP107394:5430998-5432320 [Klebsiella pneumoniae]
MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHYFDNLLPDSPQVRDRIVRRYQ
ARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTLDEAQLTALLTAYQSDIPLGMITSQDDFRISVAGAQEKTAL
LRMGEQWCIPQGATPTTHIIKLPIGEIKQPNATLDLRESVDNEYLCLALARELGLAVPEAEIITTPRIRALAVTRFDRRW
AQEGRVLLRLPQEDLCQAFGLPSAMKYESDGGPGIAAIMTFLLGSSEALKDRYDFMKFMVFQWLTGATDGHAKNFSIYLL
PGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATKGRKTEINAIYPRHFLATAKAVNFPLEQMLAILQEFAGHVP
QAIESARRTLPADFSSHVWQAITENMLKLHARLQQGLQAL

Download         Length: 1323 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9906.27 Da        Isoelectric Point: 8.5912

>AT261074 WP_002904790.1 NZ_CP107394:5430732-5430998 [Klebsiella pneumoniae]
MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKILQSLGVVMTLNAKAAETAPAP
DNNTDLDW

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0H3GN97

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GXD8

References