Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/DUF1778(antitoxin)
Location 3435044..3435854 Replicon chromosome
Accession NZ_CP107390
Organism Klebsiella pneumoniae strain CRKP_28

Toxin (Protein)


Gene name KacT Uniprot ID A0A0H3GMP0
Locus tag OH501_RS16905 Protein ID WP_002887280.1
Coordinates 3435321..3435854 (+) Length 178 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID J2E9Q7
Locus tag OH501_RS16900 Protein ID WP_002887278.1
Coordinates 3435044..3435310 (+) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH501_RS16880 3430916..3431260 - 345 WP_002887266.1 cation efflux system protein CusF -
OH501_RS16885 3431278..3432663 - 1386 WP_002887267.1 efflux transporter outer membrane subunit -
OH501_RS16890 3432835..3433518 + 684 WP_002887273.1 copper response regulator transcription factor CusR -
OH501_RS16895 3433508..3434941 + 1434 WP_002887275.1 Cu(+)/Ag(+) sensor histidine kinase -
OH501_RS16900 3435044..3435310 + 267 WP_002887278.1 type II toxin-antitoxin system antitoxin KacA Antitoxin
OH501_RS16905 3435321..3435854 + 534 WP_002887280.1 type II toxin-antitoxin system toxin KacT Toxin
OH501_RS16910 3435902..3437023 - 1122 WP_002887282.1 cupin domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(91-151)

Antitoxin

Vibrio phage ICP1, Orf50

(2-86)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19838.70 Da        Isoelectric Point: 5.2614

>T261050 WP_002887280.1 NZ_CP107390:3435321-3435854 [Klebsiella pneumoniae]
MEQQLTIEMIADAFSYDITGFDCGEEALNTFLKEHLKRQHDGQILRGYALVSGDTVPRLLGYYTLSGSCFERGMLPSKTQ
QKKIPYQNAPSVTLGRLAIDKSVQGQGWGEMLVAHVMRVVWGASKAVGIYGLFVEALNEKAKAFYLRLGFIQLVDENSNL
LFYPTKSIEQLFTDDES

Download         Length: 534 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9996.46 Da        Isoelectric Point: 10.1757

>AT261050 WP_002887278.1 NZ_CP107390:3435044-3435310 [Klebsiella pneumoniae]
MPALKKQRIDLRLTDDDKSIIEEAAAISNQTITQFVVASASERAAEVIEQHRRMVLNEQSWSLVMEAITQPPAPNDRLKR
AAKRLQTR

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 5ZGN
PDB 5XUN

Antitoxin

Source ID Structure
PDB 5ZGN
AlphaFold DB A0A0H3GLZ1

References