Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relB-parE/ParE-RHH
Location 1704..2284 Replicon plasmid unnamed2
Accession NZ_CP107369
Organism Klebsiella pneumoniae strain CRKP_32

Toxin (Protein)


Gene name parE Uniprot ID A0A8J3DTL7
Locus tag OH524_RS27890 Protein ID WP_071177730.1
Coordinates 1970..2284 (+) Length 105 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A2X1PRM1
Locus tag OH524_RS27885 Protein ID WP_000093040.1
Coordinates 1704..1982 (+) Length 93 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH524_RS27870 277..522 + 246 WP_032440458.1 hypothetical protein -
OH524_RS27875 796..1167 + 372 WP_001237044.1 cell envelope integrity protein TolA -
OH524_RS27880 1164..1529 + 366 WP_072354022.1 TonB family protein -
OH524_RS27885 1704..1982 + 279 WP_000093040.1 CopG family ribbon-helix-helix protein Antitoxin
OH524_RS27890 1970..2284 + 315 WP_071177730.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OH524_RS27895 2448..2876 + 429 WP_001140599.1 hypothetical protein -
OH524_RS27900 2902..3081 + 180 WP_000165970.1 Rop family plasmid primer RNA-binding protein -
OH524_RS27905 3108..3638 - 531 WP_071177729.1 hypothetical protein -
OH524_RS27910 3645..4376 - 732 WP_071177728.1 MobC family replication-relaxation protein -
OH524_RS27915 4376..6340 - 1965 WP_071177727.1 TraM recognition domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..11948 11948


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-96)

Antitoxin

Ribbon-helix-helix protein, CopG

(5-42)


Sequences

Toxin        


Download         Length: 105 a.a.        Molecular weight: 11805.73 Da        Isoelectric Point: 9.8324

>T260962 WP_071177730.1 NZ_CP107369:1970-2284 [Klebsiella pneumoniae]
MPQVTISALAQRDLQRLQDFLKTKNRLAARKGGEVIVRAIQQLKTLPDIGRPVPFLPLEYKELVIGFGDSGYVMLYRHDR
EMDQIVIVTVRHQKESGYPGADSL

Download         Length: 315 bp

Antitoxin


Download         Length: 93 a.a.        Molecular weight: 10709.73 Da        Isoelectric Point: 4.7561

>AT260962 WP_000093040.1 NZ_CP107369:1704-1982 [Klebsiella pneumoniae]
MSSATSIRLDEELKDRLKTLADDRHRSAHALMLEAITEYIDREEKRSQYLRDGQAAWQHYQETGLHLTAEEAEAWISTWG
TENEQDAPPCHR

Download         Length: 279 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A2X1PRM1

References