Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relB-parE/ParE-RHH
Location 6032..6612 Replicon plasmid unnamed5
Accession NZ_CP107357
Organism Klebsiella pneumoniae strain CRKP_35

Toxin (Protein)


Gene name parE Uniprot ID A0A8J3DTL7
Locus tag OH515_RS28560 Protein ID WP_071177730.1
Coordinates 6032..6346 (-) Length 105 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A2X1PRM1
Locus tag OH515_RS28565 Protein ID WP_000093040.1
Coordinates 6334..6612 (-) Length 93 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OH515_RS28535 1976..3940 + 1965 WP_071177727.1 TraM recognition domain-containing protein -
OH515_RS28540 3940..4671 + 732 WP_071177728.1 MobC family replication-relaxation protein -
OH515_RS28545 4678..5208 + 531 WP_071177729.1 hypothetical protein -
OH515_RS28550 5235..5414 - 180 WP_000165970.1 Rop family plasmid primer RNA-binding protein -
OH515_RS28555 5440..5868 - 429 WP_001140599.1 hypothetical protein -
OH515_RS28560 6032..6346 - 315 WP_071177730.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
OH515_RS28565 6334..6612 - 279 WP_000093040.1 CopG family ribbon-helix-helix protein Antitoxin
OH515_RS28570 6787..7152 - 366 WP_072354022.1 TonB family protein -
OH515_RS28575 7149..7520 - 372 WP_001237044.1 cell envelope integrity protein TolA -
OH515_RS28580 7794..8039 - 246 WP_032440458.1 hypothetical protein -
OH515_RS28585 8366..10051 + 1686 WP_032440457.1 colicin-like bacteriocin tRNase domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..10060 10060


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-96)

Antitoxin

Ribbon-helix-helix protein, CopG

(5-42)


Sequences

Toxin        


Download         Length: 105 a.a.        Molecular weight: 11805.73 Da        Isoelectric Point: 9.8324

>T260894 WP_071177730.1 NZ_CP107357:c6346-6032 [Klebsiella pneumoniae]
MPQVTISALAQRDLQRLQDFLKTKNRLAARKGGEVIVRAIQQLKTLPDIGRPVPFLPLEYKELVIGFGDSGYVMLYRHDR
EMDQIVIVTVRHQKESGYPGADSL

Download         Length: 315 bp

Antitoxin


Download         Length: 93 a.a.        Molecular weight: 10709.73 Da        Isoelectric Point: 4.7561

>AT260894 WP_000093040.1 NZ_CP107357:c6612-6334 [Klebsiella pneumoniae]
MSSATSIRLDEELKDRLKTLADDRHRSAHALMLEAITEYIDREEKRSQYLRDGQAAWQHYQETGLHLTAEEAEAWISTWG
TENEQDAPPCHR

Download         Length: 279 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A2X1PRM1

References