Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 707360..707887 Replicon chromosome
Accession NZ_CP107244
Organism Achromobacter sp. SS2-2022

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag N3Z32_RS03195 Protein ID WP_268081220.1
Coordinates 707612..707887 (+) Length 92 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag N3Z32_RS03190 Protein ID WP_268081219.1
Coordinates 707360..707578 (+) Length 73 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N3Z32_RS03160 (N3Z32_03160) 702796..703182 + 387 WP_268081213.1 DUF6152 family protein -
N3Z32_RS03165 (N3Z32_03165) 703201..703686 + 486 WP_268081214.1 DUF2214 domain-containing protein -
N3Z32_RS03170 (N3Z32_03170) 703735..704022 - 288 WP_268081215.1 cytochrome c -
N3Z32_RS03175 (N3Z32_03175) 704123..705361 - 1239 WP_268081216.1 sulfite oxidase -
N3Z32_RS03180 (N3Z32_03180) 705611..706558 - 948 WP_268081217.1 sensor domain-containing diguanylate cyclase -
N3Z32_RS03185 (N3Z32_03185) 706576..707034 - 459 WP_268081218.1 hypothetical protein -
N3Z32_RS03190 (N3Z32_03190) 707360..707578 + 219 WP_268081219.1 stability determinant Antitoxin
N3Z32_RS03195 (N3Z32_03195) 707612..707887 + 276 WP_268081220.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
N3Z32_RS03200 (N3Z32_03200) 707914..708903 - 990 WP_268082350.1 LysR family transcriptional regulator -
N3Z32_RS03205 (N3Z32_03205) 709099..710265 + 1167 WP_268082351.1 CoA transferase -
N3Z32_RS03210 (N3Z32_03210) 710265..711329 + 1065 WP_268081221.1 NADPH:quinone oxidoreductase family protein -
N3Z32_RS03215 (N3Z32_03215) 711278..712303 + 1026 WP_268081222.1 tripartite tricarboxylate transporter substrate binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-86)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 92 a.a.        Molecular weight: 10350.74 Da        Isoelectric Point: 5.0264

>T260555 WP_268081220.1 NZ_CP107244:707612-707887 [Achromobacter sp. SS2-2022]
MLPIFWSASALDDLDEITNYIAEYDVHAAIGMHELIENAVHPASEHPYLYRPGRVPGTREIVAHPNYILVYEVRADHIGV
IAVMHARQEYP

Download         Length: 276 bp

Antitoxin


Download         Length: 73 a.a.        Molecular weight: 8234.24 Da        Isoelectric Point: 9.9898

>AT260555 WP_268081219.1 NZ_CP107244:707360-707578 [Achromobacter sp. SS2-2022]
MSPTLSPIVSEFETEEQAVSYDRWFRAKVQASRDDPRPSIPHDAAMARIREKLAKKLADHDAAPATRRSRDR

Download         Length: 219 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References