Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4584535..4584907 Replicon chromosome
Accession NZ_CP106869
Organism Xanthomonas sp. AM6

Toxin (Protein)


Gene name EcnB Uniprot ID -
Locus tag OCJ37_RS19640 Protein ID WP_263111362.1
Coordinates 4584535..4584669 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID -
Locus tag OCJ37_RS19645 Protein ID WP_263111363.1
Coordinates 4584755..4584907 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OCJ37_RS19620 (OCJ37_19620) 4580581..4581504 - 924 WP_263111358.1 MBL fold metallo-hydrolase -
OCJ37_RS19625 (OCJ37_19625) 4581811..4583106 - 1296 WP_263111359.1 tryptophan--tRNA ligase -
OCJ37_RS19630 (OCJ37_19630) 4583216..4584049 + 834 WP_263111360.1 hypothetical protein -
OCJ37_RS19635 (OCJ37_19635) 4584123..4584338 - 216 WP_263111361.1 CsbD family protein -
OCJ37_RS19640 (OCJ37_19640) 4584535..4584669 - 135 WP_263111362.1 entericidin A/B family lipoprotein Toxin
OCJ37_RS19645 (OCJ37_19645) 4584755..4584907 - 153 WP_263111363.1 entericidin A/B family lipoprotein Antitoxin
OCJ37_RS19650 (OCJ37_19650) 4585054..4585977 - 924 WP_263111364.1 arginase -
OCJ37_RS19655 (OCJ37_19655) 4586198..4586971 - 774 WP_263111365.1 hypothetical protein -
OCJ37_RS19660 (OCJ37_19660) 4586973..4589345 - 2373 WP_263111366.1 filamentous hemagglutinin N-terminal domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4604.35 Da        Isoelectric Point: 7.9930

>T259913 WP_263111362.1 NZ_CP106869:c4584669-4584535 [Xanthomonas sp. AM6]
MKRTFAWMLLAMFSVGLLSGCNTVAGAGKDVQSAGEKVEDAAKN

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5275.30 Da        Isoelectric Point: 7.5954

>AT259913 WP_263111363.1 NZ_CP106869:c4584907-4584755 [Xanthomonas sp. AM6]
MKRLLTLMMLTLFCAGMLTGCNTMAGAGKDMQKAGEKVEDKAGDCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References