Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE(toxin)
Location 197354..197907 Replicon chromosome
Accession NZ_CP104835
Organism Achromobacter xylosoxidans strain 2021CK-01139

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag N4T34_RS01010 Protein ID WP_026384933.1
Coordinates 197629..197907 (+) Length 93 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag N4T34_RS01005 Protein ID WP_054482352.1
Coordinates 197354..197560 (+) Length 69 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N4T34_RS00990 (N4T34_00990) 193993..194970 - 978 WP_054482353.1 tripartite tricarboxylate transporter substrate binding protein -
N4T34_RS00995 (N4T34_00995) 195162..195812 - 651 WP_049052563.1 hypothetical protein -
N4T34_RS01000 (N4T34_01000) 195811..197256 + 1446 WP_047992431.1 RNA polymerase factor sigma-54 -
N4T34_RS01005 (N4T34_01005) 197354..197560 + 207 WP_054482352.1 hypothetical protein Antitoxin
N4T34_RS01010 (N4T34_01010) 197629..197907 + 279 WP_026384933.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
N4T34_RS01015 (N4T34_01015) 198086..198385 + 300 WP_006386990.1 (2Fe-2S)-binding protein -
N4T34_RS01020 (N4T34_01020) 198355..199275 - 921 WP_054482351.1 LysR substrate-binding domain-containing protein -
N4T34_RS01025 (N4T34_01025) 199440..200303 + 864 WP_236260965.1 DMT family transporter -
N4T34_RS01030 (N4T34_01030) 200728..201204 + 477 WP_006386993.1 bacterioferritin -
N4T34_RS01035 (N4T34_01035) 201289..201988 - 700 Protein_206 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-90)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 93 a.a.        Molecular weight: 10369.93 Da        Isoelectric Point: 9.5759

>T259205 WP_026384933.1 NZ_CP104835:197629-197907 [Achromobacter xylosoxidans]
MLDVSWLQTAADDLAGIISYIAERSPQAARNLRQRIDNAVLSLARHPCRYRAGRVSGTRECVVHPNYVVVYRVTALAIEV
VNIVHARREYPP

Download         Length: 279 bp

Antitoxin


Download         Length: 69 a.a.        Molecular weight: 7702.59 Da        Isoelectric Point: 4.5026

>AT259205 WP_054482352.1 NZ_CP104835:197354-197560 [Achromobacter xylosoxidans]
MGPIPSSILSEFETEEQAVSYDRWFRAKVQASLDDPRPAVSHQRVMARIDAIIETACRRQLDPQDGES

Download         Length: 207 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References