Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | VII | Classification (family/domain) | HepT-MntA/HepT(toxin) |
Location | 1479890..1480689 | Replicon | chromosome |
Accession | NZ_CP104733 | ||
Organism | Pectobacterium sp. F1-1 |
Toxin (Protein)
Gene name | hepT | Uniprot ID | - |
Locus tag | NAL19_RS06470 | Protein ID | WP_263059151.1 |
Coordinates | 1479890..1480309 (-) | Length | 140 a.a. |
Antitoxin (Protein)
Gene name | mntA | Uniprot ID | - |
Locus tag | NAL19_RS06475 | Protein ID | WP_263059152.1 |
Coordinates | 1480306..1480689 (-) | Length | 128 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NAL19_RS06450 (NAL19_1387) | 1474955..1475596 | + | 642 | WP_015839564.1 | uridine kinase | - |
NAL19_RS06455 (NAL19_1388) | 1475721..1476302 | + | 582 | WP_225087396.1 | dCTP deaminase | - |
NAL19_RS06460 (NAL19_1389) | 1476396..1478231 | + | 1836 | WP_263059149.1 | outer membrane assembly protein AsmA | - |
NAL19_RS06465 (NAL19_1390) | 1478494..1479846 | + | 1353 | WP_263059150.1 | anaerobic C4-dicarboxylate transporter DcuC | - |
NAL19_RS06470 (NAL19_1391) | 1479890..1480309 | - | 420 | WP_263059151.1 | DUF86 domain-containing protein | Toxin |
NAL19_RS06475 (NAL19_1392) | 1480306..1480689 | - | 384 | WP_263059152.1 | nucleotidyltransferase domain-containing protein | Antitoxin |
NAL19_RS06480 (NAL19_1393) | 1480803..1482389 | - | 1587 | WP_263059153.1 | TerC family protein | - |
NAL19_RS06485 (NAL19_1394) | 1483041..1484126 | + | 1086 | WP_263059674.1 | UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase | - |
NAL19_RS06490 (NAL19_1395) | 1484250..1485386 | + | 1137 | WP_263059154.1 | polysaccharide export protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 140 a.a. Molecular weight: 16066.44 Da Isoelectric Point: 7.3843
>T259087 WP_263059151.1 NZ_CP104733:c1480309-1479890 [Pectobacterium sp. F1-1]
MTDILLNKSSTIQRCLRRIREEFDTEEGFRQNFTKQDSVILNIQRACEAAIDIANYLIRIKQLGIPQSSRDSFALLAAKQ
IITIDLSDNLQKMVGLRNIAVHDYQALNLDIVIHVISHRLSDFEHFIKQIARYSDSQHL
MTDILLNKSSTIQRCLRRIREEFDTEEGFRQNFTKQDSVILNIQRACEAAIDIANYLIRIKQLGIPQSSRDSFALLAAKQ
IITIDLSDNLQKMVGLRNIAVHDYQALNLDIVIHVISHRLSDFEHFIKQIARYSDSQHL
Download Length: 420 bp
Antitoxin
Download Length: 128 a.a. Molecular weight: 14453.67 Da Isoelectric Point: 4.9401
>AT259087 WP_263059152.1 NZ_CP104733:c1480689-1480306 [Pectobacterium sp. F1-1]
MFDKIVLTLKKQIPDIKIIYLFGSQATGNARADSDIDIAIMATRALDPVERWELSNQLAKEVGHDVDLIDLLQASTVLKM
EIVRNGKLLYDAETAAREFEMTTLSMYQHLQKERADIIRSFNQDLKA
MFDKIVLTLKKQIPDIKIIYLFGSQATGNARADSDIDIAIMATRALDPVERWELSNQLAKEVGHDVDLIDLLQASTVLKM
EIVRNGKLLYDAETAAREFEMTTLSMYQHLQKERADIIRSFNQDLKA
Download Length: 384 bp
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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