Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type VII Classification (family/domain) HepT-MntA/HepT(toxin)
Location 1479890..1480689 Replicon chromosome
Accession NZ_CP104733
Organism Pectobacterium sp. F1-1

Toxin (Protein)


Gene name hepT Uniprot ID -
Locus tag NAL19_RS06470 Protein ID WP_263059151.1
Coordinates 1479890..1480309 (-) Length 140 a.a.

Antitoxin (Protein)


Gene name mntA Uniprot ID -
Locus tag NAL19_RS06475 Protein ID WP_263059152.1
Coordinates 1480306..1480689 (-) Length 128 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NAL19_RS06450 (NAL19_1387) 1474955..1475596 + 642 WP_015839564.1 uridine kinase -
NAL19_RS06455 (NAL19_1388) 1475721..1476302 + 582 WP_225087396.1 dCTP deaminase -
NAL19_RS06460 (NAL19_1389) 1476396..1478231 + 1836 WP_263059149.1 outer membrane assembly protein AsmA -
NAL19_RS06465 (NAL19_1390) 1478494..1479846 + 1353 WP_263059150.1 anaerobic C4-dicarboxylate transporter DcuC -
NAL19_RS06470 (NAL19_1391) 1479890..1480309 - 420 WP_263059151.1 DUF86 domain-containing protein Toxin
NAL19_RS06475 (NAL19_1392) 1480306..1480689 - 384 WP_263059152.1 nucleotidyltransferase domain-containing protein Antitoxin
NAL19_RS06480 (NAL19_1393) 1480803..1482389 - 1587 WP_263059153.1 TerC family protein -
NAL19_RS06485 (NAL19_1394) 1483041..1484126 + 1086 WP_263059674.1 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase -
NAL19_RS06490 (NAL19_1395) 1484250..1485386 + 1137 WP_263059154.1 polysaccharide export protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease HepT-like

(13-130)

Antitoxin

Polymerase beta, nucleotidyltransferase

(4-93)


Sequences

Toxin        


Download         Length: 140 a.a.        Molecular weight: 16066.44 Da        Isoelectric Point: 7.3843

>T259087 WP_263059151.1 NZ_CP104733:c1480309-1479890 [Pectobacterium sp. F1-1]
MTDILLNKSSTIQRCLRRIREEFDTEEGFRQNFTKQDSVILNIQRACEAAIDIANYLIRIKQLGIPQSSRDSFALLAAKQ
IITIDLSDNLQKMVGLRNIAVHDYQALNLDIVIHVISHRLSDFEHFIKQIARYSDSQHL

Download         Length: 420 bp

Antitoxin


Download         Length: 128 a.a.        Molecular weight: 14453.67 Da        Isoelectric Point: 4.9401

>AT259087 WP_263059152.1 NZ_CP104733:c1480689-1480306 [Pectobacterium sp. F1-1]
MFDKIVLTLKKQIPDIKIIYLFGSQATGNARADSDIDIAIMATRALDPVERWELSNQLAKEVGHDVDLIDLLQASTVLKM
EIVRNGKLLYDAETAAREFEMTTLSMYQHLQKERADIIRSFNQDLKA

Download         Length: 384 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References