257705

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) hicAB/HicA-HicB
Location 2516495..2517174 Replicon chromosome
Accession NZ_CP104350
Organism Acinetobacter baumannii strain 2021CK-01333

Toxin (Protein)


Gene name hicA Uniprot ID A0A2S4SYJ5
Locus tag N4T37_RS14300 Protein ID WP_002108505.1
Coordinates 2516495..2516677 (+) Length 61 a.a.

Antitoxin (Protein)


Gene name hicB Uniprot ID N9L2H6
Locus tag N4T37_RS14305 Protein ID WP_000966688.1
Coordinates 2516770..2517174 (+) Length 135 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N4T37_RS14260 (N4T37_14255) 2511650..2512057 + 408 WP_000255076.1 hypothetical protein -
N4T37_RS14265 (N4T37_14260) 2512029..2512397 + 369 WP_025466445.1 hypothetical protein -
N4T37_RS14270 (N4T37_14265) 2512399..2512797 + 399 WP_025466443.1 phage tail terminator-like protein -
N4T37_RS14275 (N4T37_14270) 2512799..2513017 + 219 WP_001277694.1 hypothetical protein -
N4T37_RS14280 (N4T37_14275) 2513113..2513466 + 354 WP_031975507.1 hypothetical protein -
N4T37_RS14285 (N4T37_14280) 2513466..2514614 + 1149 WP_033841386.1 hypothetical protein -
N4T37_RS14290 (N4T37_14285) 2514667..2515584 + 918 WP_000094249.1 phage tail tube protein -
N4T37_RS14295 (N4T37_14290) 2515654..2516169 + 516 WP_001185610.1 hypothetical protein -
N4T37_RS14300 (N4T37_14295) 2516495..2516677 + 183 WP_002108505.1 type II toxin-antitoxin system HicA family toxin Toxin
N4T37_RS14305 (N4T37_14300) 2516770..2517174 + 405 WP_000966688.1 type II toxin-antitoxin system HicB family antitoxin Antitoxin
N4T37_RS14310 (N4T37_14305) 2517273..2517449 + 177 WP_075149899.1 hypothetical protein -
N4T37_RS14315 (N4T37_14310) 2517458..2517781 + 324 WP_000523928.1 DUF4236 domain-containing protein -
N4T37_RS14320 (N4T37_14315) 2517814..2518197 + 384 WP_000725050.1 hypothetical protein -
N4T37_RS14325 (N4T37_14320) 2518259..2519005 + 747 WP_000599536.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 2484229..2535312 51083


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.



Sequences


Toxin        


Download         Length: 61 a.a.        Molecular weight: 6685.80 Da        Isoelectric Point: 10.5523

>T257705 WP_002108505.1 NZ_CP104350:2516495-2516677 [Acinetobacter baumannii]
VKSLDLIKMIEADGWYEVRVSGSHHHFKHPTKKGLVTISHPKKDLPNGTVKSILKQAGLN

Download         Length: 183 bp


Antitoxin


Download         Length: 135 a.a.        Molecular weight: 14647.69 Da        Isoelectric Point: 4.4328

>AT257705 WP_000966688.1 NZ_CP104350:2516770-2517174 [Acinetobacter baumannii]
MLYPIAIERGSDTEAFGVTVPDIPGCFSAGDTLEEAIENVKEAISGHLEILAEDGEEIPLASELVKFVDDPEYKGMIWAV
TEVDVSRYLGKPEKINVTLPSRLIRKIDENVGKGKRYTTRSAFLAAGAEKLLHA

Download         Length: 405 bp


Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A2S4SYJ5


Antitoxin

Source ID Structure
AlphaFold DB N9L2H6

References