Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) slvAT/RES(toxin)
Location 86668..87623 Replicon plasmid unnamed2
Accession NZ_CP104217
Organism Burkholderia gladioli strain ZN-S4

Toxin (Protein)


Gene name slvT Uniprot ID -
Locus tag NYZ96_RS35780 Protein ID WP_123035900.1
Coordinates 87090..87623 (+) Length 178 a.a.

Antitoxin (Protein)


Gene name slvA Uniprot ID -
Locus tag NYZ96_RS35775 Protein ID WP_123035901.1
Coordinates 86668..87093 (+) Length 142 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NYZ96_RS35760 (NYZ96_35760) 83787..84809 - 1023 WP_098153242.1 ParB/RepB/Spo0J family partition protein -
NYZ96_RS35765 (NYZ96_35765) 84812..85465 - 654 WP_123035903.1 AAA family ATPase -
NYZ96_RS35770 (NYZ96_35770) 86382..86534 + 153 WP_164465441.1 hypothetical protein -
NYZ96_RS35775 (NYZ96_35775) 86668..87093 + 426 WP_123035901.1 DUF2384 domain-containing protein Antitoxin
NYZ96_RS35780 (NYZ96_35780) 87090..87623 + 534 WP_123035900.1 RES family NAD+ phosphorylase Toxin
NYZ96_RS35785 (NYZ96_35785) 88268..88489 + 222 WP_123035899.1 hypothetical protein -
NYZ96_RS35790 (NYZ96_35790) 88565..88849 + 285 WP_017917860.1 hypothetical protein -
NYZ96_RS35795 (NYZ96_35795) 88864..89106 + 243 WP_123035898.1 hypothetical protein -
NYZ96_RS35800 (NYZ96_35800) 89103..89546 + 444 WP_123035897.1 hypothetical protein -
NYZ96_RS35805 (NYZ96_35805) 89910..91739 + 1830 WP_123035896.1 site-specific integrase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..145919 145919


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(11-161)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19149.81 Da        Isoelectric Point: 4.8722

>T257424 WP_123035900.1 NZ_CP104217:87090-87623 [Burkholderia gladioli]
MILTPLQDITAYRMHVPKWAVAPTSGAGAARAGGRANRIGTPALYLALEVATAVAEYQQLSPLLPPGTLVSYRVQATPVV
DFTGGFRADLWPPLWESFFCDWRRDWFNARIEPPSWVLGDEAIAAGAKGILFRSTQAAGGTNLVLFVDQLAEGDRLDVND
PACALPRNQVSWGEPTA

Download         Length: 534 bp

Antitoxin


Download         Length: 142 a.a.        Molecular weight: 15065.94 Da        Isoelectric Point: 5.7034

>AT257424 WP_123035901.1 NZ_CP104217:86668-87093 [Burkholderia gladioli]
MSTLAPAREPAAPACGPAPASFDAFLSALREPDTTAPVLSARRYVAALNIDLQTLADQAHVHRNTVARAPQSASVQQFLR
EAIRVIRAATDLSGDVQRALFWYRNEPLAVFDYQTAETLVSAGRADDVVRYVASLEAGAAG

Download         Length: 426 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References