25739

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazF-pemI/MazF(toxin)
Location 242427..243063 Replicon chromosome
Accession NC_016593
Organism Geobacillus thermoleovorans CCB US3 UF5

Toxin (Protein)


Gene name mazF Uniprot ID L7ZVP1
Locus tag GTCCBUS3UF5_RS01275 Protein ID WP_003253417.1
Coordinates 242713..243063 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name pemI Uniprot ID G8N2B5
Locus tag GTCCBUS3UF5_RS01270 Protein ID WP_011229742.1
Coordinates 242427..242708 (+) Length 94 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GTCCBUS3UF5_RS01250 238684..239301 - 618 WP_014194682.1 rhomboid family intramembrane serine protease -
GTCCBUS3UF5_RS01255 239415..239804 + 390 WP_011229738.1 holo-ACP synthase -
GTCCBUS3UF5_RS01260 239884..240897 + 1014 WP_014194683.1 outer membrane lipoprotein carrier protein LolA -
GTCCBUS3UF5_RS01265 241146..242300 + 1155 WP_011229741.1 alanine racemase -
GTCCBUS3UF5_RS01270 242427..242708 + 282 WP_011229742.1 hypothetical protein Antitoxin
GTCCBUS3UF5_RS01275 242713..243063 + 351 WP_003253417.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
GTCCBUS3UF5_RS01280 243395..245560 + 2166 WP_014194685.1 RNA-binding transcriptional accessory protein -
GTCCBUS3UF5_RS18865 245579..245692 - 114 WP_013144046.1 cortex morphogenetic protein CmpA -
GTCCBUS3UF5_RS01285 245782..246231 + 450 WP_013144047.1 SprT family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(4-111)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12992.00 Da        Isoelectric Point: 4.8781

>T25739 WP_003253417.1 NC_016593:242713-243063 [Geobacillus thermoleovorans CCB_US3_UF5]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTVIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLGLIDF

Download         Length: 351 bp

>T25739 NC_016593:242713-243063 [Geobacillus thermoleovorans CCB_US3_UF5]
TTGATTGTCAAACGTGGCGACGTGTATTTTGCGGACCTTTCCCCGGTTGTTGGCTCGGAGCAGGGCGGCGTGCGCCCCGT
GTTGGTGATCCAAAACGATATCGGCAATCGTTTTAGCCCGACGGTGATTGTCGCGGCGATTACGGCGCAAATCCAAAAAG
CGAAGCTGCCGACGCATGTCGAGATTGACGCGAAACGCTACGGGTTTGAACGCGATTCGGTCATTTTGCTTGAGCAAATT
CGCACGATCGACAAGCAACGGCTGACCGATAAAATCACTCATTTGGACGATGAAATGATGGATAAAGTCGATGAGGCGCT
GCAAATTAGCTTAGGGCTGATCGACTTTTGA

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10639.14 Da        Isoelectric Point: 7.2027

>AT25739 WP_011229742.1 NC_016593:242427-242708 [Geobacillus thermoleovorans CCB_US3_UF5]
VSESGATAEIVVRLPQSLLTELDVLVKQENGNRNELIYQATKMYIRERKKRQIREAMRRGYMEMAKINLSIASEAFHAEY
EADHTVERLVSGG

Download         Length: 282 bp

>AT25739 NC_016593:242427-242708 [Geobacillus thermoleovorans CCB_US3_UF5]
GTGTCGGAATCTGGCGCAACAGCGGAAATCGTCGTTCGTTTGCCGCAGTCGCTGCTGACAGAACTGGACGTGCTCGTAAA
GCAGGAAAACGGCAACCGCAATGAACTCATTTATCAAGCGACGAAAATGTACATTCGCGAGCGGAAGAAACGGCAAATTC
GTGAGGCGATGAGACGAGGCTACATGGAAATGGCGAAAATCAATTTATCTATCGCTTCTGAAGCGTTTCATGCTGAATAC
GAGGCCGACCACACCGTTGAACGCTTAGTTAGCGGGGGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U9ERQ4

Antitoxin

Source ID Structure
AlphaFold DB A0A7U9ETW5

References