257352

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) BrnTA/BrnT-BrnA
Location 3109758..3110341 Replicon chromosome
Accession NZ_CP104158
Organism Rhizobium tropici strain CB3060

Toxin (Protein)


Gene name brnT Uniprot ID -
Locus tag N2601_RS15015 Protein ID WP_245463903.1
Coordinates 3109758..3110033 (+) Length 92 a.a.

Antitoxin (Protein)


Gene name brnA Uniprot ID -
Locus tag N2601_RS15020 Protein ID WP_104824556.1
Coordinates 3110027..3110341 (+) Length 105 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N2601_RS14990 (N2601_14990) 3105424..3106542 - 1119 WP_260303983.1 D-alanyl-D-alanine carboxypeptidase family protein -
N2601_RS14995 (N2601_14995) 3106807..3107967 + 1161 WP_104824552.1 M20 aminoacylase family protein -
N2601_RS15005 (N2601_15005) 3108515..3108898 + 384 WP_260303179.1 hypothetical protein -
N2601_RS15010 (N2601_15010) 3108909..3109574 - 666 WP_104824555.1 hypothetical protein -
N2601_RS15015 (N2601_15015) 3109758..3110033 + 276 WP_245463903.1 BrnT family toxin Toxin
N2601_RS15020 (N2601_15020) 3110027..3110341 + 315 WP_104824556.1 BrnA antitoxin family protein Antitoxin
N2601_RS15025 (N2601_15025) 3110420..3110932 + 513 WP_104825236.1 EutP/PduV family microcompartment system protein -
N2601_RS15030 (N2601_15030) 3110982..3111248 - 267 WP_104824557.1 BON domain-containing protein -
N2601_RS15035 (N2601_15035) 3111452..3112645 + 1194 WP_104824558.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
N2601_RS15040 (N2601_15040) 3112684..3113598 + 915 WP_104824559.1 pyridoxal-phosphate dependent enzyme -
N2601_RS15045 (N2601_15045) 3113759..3114388 + 630 WP_104824560.1 LysE family translocator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(14-85)

Antitoxin

BrnA antitoxin of type II toxin-antitoxin system

(28-101)


Sequences

Toxin        


Download         Length: 92 a.a.        Molecular weight: 10127.77 Da        Isoelectric Point: 9.8114

>T257352 WP_245463903.1 NZ_CP104158:3109758-3110033 [Rhizobium tropici]
MNFRVRKLYGDHLDELKRETNLAKHGLDFADLDIEFFAGSVVVPANDGRSMAIGELDGQIVAAVVFKPLGSEAISVISMR
PASRKKRKLLW

Download         Length: 276 bp

Antitoxin


Download         Length: 105 a.a.        Molecular weight: 11661.36 Da        Isoelectric Point: 10.1854

>AT257352 WP_104824556.1 NZ_CP104158:3110027-3110341 [Rhizobium tropici]
MVTKFSSRRPLNEREEAEIQKMIASDPDAPEATDEQLAQAKPFAEAFPDLMGSIKRARGRPKVDAPKVAVTLRIDPDVLE
RFQSKGKDWRSDMTHALRKAAGLK

Download         Length: 315 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References