257299

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RHH(antitoxin)
Location 123039..123592 Replicon chromosome
Accession NZ_CP104130
Organism Sinorhizobium sp. K101

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag N0Q91_RS00610 Protein ID WP_244563892.1
Coordinates 123338..123592 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag N0Q91_RS00605 Protein ID WP_085026101.1
Coordinates 123039..123311 (+) Length 91 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N0Q91_RS00580 (N0Q91_00580) 118172..118975 + 804 WP_275596280.1 sulfite exporter TauE/SafE family protein -
N0Q91_RS00585 (N0Q91_00585) 119230..120255 + 1026 WP_275596281.1 zincin-like metallopeptidase domain-containing protein -
N0Q91_RS00590 (N0Q91_00590) 120649..121018 - 370 Protein_117 helix-turn-helix domain-containing protein -
N0Q91_RS00595 (N0Q91_00595) 121170..122048 + 879 WP_275596282.1 SDR family oxidoreductase -
N0Q91_RS00600 (N0Q91_00600) 122568..122872 + 305 Protein_119 hypothetical protein -
N0Q91_RS00605 (N0Q91_00605) 123039..123311 + 273 WP_085026101.1 CopG family ribbon-helix-helix protein Antitoxin
N0Q91_RS00610 (N0Q91_00610) 123338..123592 + 255 WP_244563892.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
N0Q91_RS00615 (N0Q91_00615) 124202..124546 + 345 Protein_122 hypothetical protein -
N0Q91_RS00620 (N0Q91_00620) 124875..125486 + 612 WP_275596283.1 tyrosine-type recombinase/integrase -
N0Q91_RS00625 (N0Q91_00625) 125581..125673 + 93 Protein_124 antirestriction protein ArdC -
N0Q91_RS00630 (N0Q91_00630) 126327..126638 + 312 WP_085026105.1 DUF736 domain-containing protein -
N0Q91_RS00635 (N0Q91_00635) 126934..127059 - 126 WP_275531997.1 hypothetical protein -
N0Q91_RS00640 (N0Q91_00640) 127402..127536 + 135 WP_275596284.1 hypothetical protein -
N0Q91_RS00645 (N0Q91_00645) 127634..127891 - 258 WP_275596385.1 WGR domain-containing protein -
N0Q91_RS00650 (N0Q91_00650) 128096..128532 - 437 Protein_129 thermonuclease family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(2-82)

Antitoxin

Ribbon-helix-helix protein, CopG

(3-40)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 9503.79 Da        Isoelectric Point: 6.7167

>T257299 WP_244563892.1 NZ_CP104130:123338-123592 [Sinorhizobium sp. K101]
MERCRRFLATKAPEAARRAGQAIERQFLLLETAPDIGRPFSEAPELRELVIAFGDSGYVALYHHQPADDAVYVLAFRHQK
EAGY

Download         Length: 255 bp

Antitoxin


Download         Length: 91 a.a.        Molecular weight: 10571.87 Da        Isoelectric Point: 6.7205

>AT257299 WP_085026101.1 NZ_CP104130:123039-123311 [Sinorhizobium sp. K101]
MATSLKIDDTLKSRVQQLASQRRRSPHWIMLEAIQQYVEREEARESFKQEALASWAAYKETGRHLTGEEVRTWLTTWGTD
DEKPVPECHK

Download         Length: 273 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References