Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) prcAT/RES-TIGR02293
Location 549523..550371 Replicon chromosome
Accession NZ_CP104035
Organism Rhizobium leguminosarum bv. viciae strain SRDI969

Toxin (Protein)


Gene name PrcT Uniprot ID -
Locus tag N2A41_RS02635 Protein ID WP_260110194.1
Coordinates 549523..549957 (-) Length 145 a.a.

Antitoxin (Protein)


Gene name PrcA Uniprot ID -
Locus tag N2A41_RS02640 Protein ID WP_222385751.1
Coordinates 549961..550371 (-) Length 137 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N2A41_RS02615 (N2A41_02615) 545272..546915 - 1644 WP_017967179.1 chaperonin GroEL -
N2A41_RS02620 (N2A41_02620) 546988..547284 - 297 WP_003545797.1 co-chaperone GroES -
N2A41_RS02625 (N2A41_02625) 547679..548527 + 849 WP_260110193.1 TIGR01459 family HAD-type hydrolase -
N2A41_RS02630 (N2A41_02630) 548542..549534 + 993 WP_222385837.1 bifunctional riboflavin kinase/FAD synthetase -
N2A41_RS02635 (N2A41_02635) 549523..549957 - 435 WP_260110194.1 RES family NAD+ phosphorylase Toxin
N2A41_RS02640 (N2A41_02640) 549961..550371 - 411 WP_222385751.1 DUF2384 domain-containing protein Antitoxin
N2A41_RS02645 (N2A41_02645) 550663..553554 + 2892 WP_260110195.1 isoleucine--tRNA ligase -
N2A41_RS02650 (N2A41_02650) 553688..554317 + 630 WP_017962987.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(3-139)

Antitoxin

Antitoxin Xre

(51-135)


Sequences

Toxin        


Download         Length: 145 a.a.        Molecular weight: 16315.83 Da        Isoelectric Point: 6.4798

>T257071 WP_260110194.1 NZ_CP104035:c549957-549523 [Rhizobium leguminosarum bv. viciae]
MILWRISNYADLSGRGGLLAPGRWHHQGIPVVYCCDHPSTALLEILVQVDLHQIPRDFQLLKIHCPDDIEVFDIGIDPAA
INQTSLTRDRGSKLLEDNDFCLLRVPSAIMPEAANILVNPRHPDASRLTIEKTIRYPFDSRLLR

Download         Length: 435 bp

Antitoxin


Download         Length: 137 a.a.        Molecular weight: 15269.45 Da        Isoelectric Point: 5.7002

>AT257071 WP_222385751.1 NZ_CP104035:c550371-549961 [Rhizobium leguminosarum bv. viciae]
MLGFPQTSESMTIRERLEIASHGSVQVYDGAMALKLTELGFSVEEIYRFVAPRRTLARRNANGEPLTVEENDGALRIVRI
ADMAKRIFGDRAVAFDWLRKPNRGMDGITPIDLLESETGARLVEQALHQIDHGIYV

Download         Length: 411 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References