Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/ParE-RelB |
Location | 897567..898020 | Replicon | chromosome |
Accession | NZ_CP104025 | ||
Organism | Erwinia amylovora strain Ea915 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | MTP51_RS03930 | Protein ID | WP_013035888.1 |
Coordinates | 897784..898020 (+) | Length | 79 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | D4HZA2 |
Locus tag | MTP51_RS03925 | Protein ID | WP_004159527.1 |
Coordinates | 897567..897794 (+) | Length | 76 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MTP51_RS03915 (MTP51_03915) | 896491..896895 | + | 405 | WP_013035886.1 | hypothetical protein | - |
MTP51_RS03920 (MTP51_03920) | 896959..897246 | - | 288 | WP_264072243.1 | type I toxin-antitoxin system SymE family toxin | - |
MTP51_RS03925 (MTP51_03925) | 897567..897794 | + | 228 | WP_004159527.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
MTP51_RS03930 (MTP51_03930) | 897784..898020 | + | 237 | WP_013035888.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
MTP51_RS03935 (MTP51_03935) | 898007..898225 | - | 219 | WP_004159522.1 | hypothetical protein | - |
MTP51_RS03940 (MTP51_03940) | 898553..900769 | + | 2217 | Protein_747 | ferrichrome porin FhuA | - |
MTP51_RS03945 (MTP51_03945) | 900818..901612 | + | 795 | WP_004159512.1 | Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC | - |
MTP51_RS03950 (MTP51_03950) | 901627..902505 | + | 879 | WP_004159509.1 | Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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