Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YafQ-DinJ
Location 821320..821881 Replicon chromosome
Accession NZ_CP104008
Organism Mycoplasma feriruminatoris strain L14822

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag MFERI14822_RS03535 Protein ID WP_278307434.1
Coordinates 821320..821616 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag MFERI14822_RS03540 Protein ID WP_278300265.1
Coordinates 821609..821881 (-) Length 91 a.a.

Genomic Context

MFERI14822_RS03515MFERI14822_RS03520MFERI14822_RS03530MFERI14822_RS03525MFERI14822_RS03535MFERI14822_RS03540MFERI14822_RS03545MFERI14822_RS03550
Location: 816459..817088 (630 bp)
Type: Others
Protein ID: WP_278299862.1
Location: 817196..818827 (1632 bp)
Type: Others
Protein ID: WP_278307433.1
Location: 819990..821285 (1296 bp)
Type: Others
Protein ID: WP_278300263.1
Location: 818860..819741 (882 bp)
Type: Others
Protein ID: WP_278287772.1
Location: 821320..821616 (297 bp)
Type: Toxin
Protein ID: WP_278307434.1
Location: 821609..821881 (273 bp)
Type: Antitoxin
Protein ID: WP_278300265.1
Location: 822065..823234 (1170 bp)
Type: Others
Protein ID: WP_278307435.1
Location: 823400..826507 (3108 bp)
Type: Others
Protein ID: WP_278307436.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
MFERI14822_RS03515 (MFERI14822_00702)816459..817088+630WP_278299862.1beta-phosphoglucomutase-
MFERI14822_RS03520 (MFERI14822_00703)817196..818827+1632WP_278307433.1LppA family lipoprotein-
MFERI14822_RS03525 (MFERI14822_00704)818860..819741-882WP_278287772.1Cof-type HAD-IIB family hydrolase-
MFERI14822_RS03530 (MFERI14822_00705)819990..821285+1296WP_278300263.1ATP-binding protein-
MFERI14822_RS03535 (MFERI14822_00706)821320..821616-297WP_278307434.1type II toxin-antitoxin system YafQ family toxinToxin
MFERI14822_RS03540 (MFERI14822_00707)821609..821881-273WP_278300265.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
MFERI14822_RS03545 (MFERI14822_00708)822065..823234-1170WP_278307435.1site-specific DNA-methyltransferase-
MFERI14822_RS03550 (MFERI14822_00709)823400..826507-3108WP_278307436.1ABC transporter substrate-binding protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, YafQ-like toxin

(7-91)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-87)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11392.37 Da        Isoelectric Point: 9.9386

>T256991 WP_278307434.1 NZ_CP104008:c821616-821320 [Mycoplasma feriruminatoris]
MTKYKIVTTKFKKDLKLAKKQNKDLNKLDYVINILIQGKELDAKYQDHSLTGIYKGYRECHIDPDLLIYKKDDDKIVIIM
LRLGSHSNLFEKQKNY

Download         Length: 297 bp

Antitoxin


Download         Length: 91 a.a.        Molecular weight: 10239.64 Da        Isoelectric Point: 4.8483

>AT256991 WP_278300265.1 NZ_CP104008:c821881-821609 [Mycoplasma feriruminatoris]
MKTTNLNVRIDKEVKHDAEAIFNELGLSTSAAINMFFKATIRNNSLPFSTKLDTPNKETLLAIKEAEELLKDPNTKYYSS
FKELLETLDD

Download         Length: 273 bp


Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References