Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | TsdAT/- |
Location | 834559..835073 | Replicon | chromosome |
Accession | NZ_CP103860 | ||
Organism | Staphylococcus aureus strain R3-8 |
Toxin (Protein)
Gene name | TsdT | Uniprot ID | T1YA99 |
Locus tag | NYR13_RS04140 | Protein ID | WP_000581792.1 |
Coordinates | 834864..835073 (+) | Length | 70 a.a. |
Antitoxin (Protein)
Gene name | TsdA | Uniprot ID | W8UW13 |
Locus tag | NYR13_RS04135 | Protein ID | WP_000138932.1 |
Coordinates | 834559..834852 (+) | Length | 98 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NYR13_RS04115 (829822) | 829822..830463 | + | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
NYR13_RS04120 (830549) | 830549..831421 | + | 873 | WP_000725802.1 | membrane protein insertase YidC | - |
NYR13_RS04125 (832234) | 832234..832881 | - | 648 | WP_001187629.1 | HD domain-containing protein | - |
NYR13_RS04130 (832909) | 832909..834393 | - | 1485 | WP_000571549.1 | cardiolipin synthase | - |
NYR13_RS04135 (834559) | 834559..834852 | + | 294 | WP_000138932.1 | copper-sensing transcriptional repressor CsoR | Antitoxin |
NYR13_RS04140 (834864) | 834864..835073 | + | 210 | WP_000581792.1 | heavy metal-associated domain-containing protein | Toxin |
NYR13_RS04145 (835201) | 835201..835338 | + | 138 | WP_000828354.1 | Lmo0850 family protein | - |
NYR13_RS04150 (835602) | 835602..836804 | - | 1203 | WP_001109939.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
NYR13_RS04155 (837122) | 837122..838192 | + | 1071 | WP_000159631.1 | D-alanine--D-alanine ligase | - |
NYR13_RS04160 (838207) | 838207..839565 | + | 1359 | WP_000611462.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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