Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | hipBA/HipA-couple_hipB |
| Location | 1943890..1945328 | Replicon | chromosome |
| Accession | NZ_CP103810 | ||
| Organism | Actinobacillus equuli subsp. haemolyticus strain CCUG19799 | ||
Toxin (Protein)
| Gene name | hipA | Uniprot ID | - |
| Locus tag | NYR64_RS08950 | Protein ID | WP_279436972.1 |
| Coordinates | 1944216..1945328 (-) | Length | 371 a.a. |
Antitoxin (Protein)
| Gene name | hipB | Uniprot ID | A3N2X7 |
| Locus tag | NYR64_RS08945 | Protein ID | WP_005613259.1 |
| Coordinates | 1943890..1944219 (-) | Length | 110 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYR64_RS08930 (NYR64_08930) | 1938998..1940278 | + | 1281 | WP_279436970.1 | threonine synthase | - |
| NYR64_RS08935 (NYR64_08935) | 1940356..1941972 | + | 1617 | WP_279436971.1 | pentapeptide repeat-containing protein | - |
| NYR64_RS08940 (NYR64_08940) | 1942270..1943595 | - | 1326 | WP_015674100.1 | MFS transporter family glucose-6-phosphate receptor UhpC | - |
| NYR64_RS08945 (NYR64_08945) | 1943890..1944219 | - | 330 | WP_005613259.1 | helix-turn-helix domain-containing protein | Antitoxin |
| NYR64_RS08950 (NYR64_08950) | 1944216..1945328 | - | 1113 | WP_279436972.1 | HipA domain-containing protein | Toxin |
| NYR64_RS08955 (NYR64_08955) | 1945358..1945549 | - | 192 | WP_279436973.1 | hypothetical protein | - |
| NYR64_RS08960 (NYR64_08960) | 1945989..1946249 | + | 261 | WP_275218489.1 | hypothetical protein | - |
| NYR64_RS08965 (NYR64_08965) | 1946217..1946897 | - | 681 | WP_279436974.1 | DNA methyltransferase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 371 a.a. Molecular weight: 42531.36 Da Isoelectric Point: 5.7089
>T256701 WP_279436972.1 NZ_CP103810:c1945328-1944216 [Actinobacillus equuli subsp. haemolyticus]
MTALADIIPAGASRRYWLEALDIKHLSISHQNYLLLKNGAISPIGNVRVKEAVPEIQSERYFPLNVVQNRQSDFLEYANQ
TGAIVGGATGAGGEAPKLLLKRQDKQIWIDNLQLGLDCDTAYLVKYPRGNYSELDCDILRAEYHYYHELRALGFSTIDTD
LMKLEEGERYPSLWLPRFDMKFKDGKWERYAMESVYSMLQKYGGNLDHEQTIRNLLNVISASQFSNDFDNRHFVIEWVKR
DLLNIAFGNSDNHGRNTAFLRDDNRIWLSPIYDFAPMRADPEGIIRTTTWAKNGDNLQEFAGEYRFDKIADGLSDLIEPD
ILLRELRMLAAQLVDLKSRLTKRGVPKSILDFPAIGFDYLPEKLQRWGLV
MTALADIIPAGASRRYWLEALDIKHLSISHQNYLLLKNGAISPIGNVRVKEAVPEIQSERYFPLNVVQNRQSDFLEYANQ
TGAIVGGATGAGGEAPKLLLKRQDKQIWIDNLQLGLDCDTAYLVKYPRGNYSELDCDILRAEYHYYHELRALGFSTIDTD
LMKLEEGERYPSLWLPRFDMKFKDGKWERYAMESVYSMLQKYGGNLDHEQTIRNLLNVISASQFSNDFDNRHFVIEWVKR
DLLNIAFGNSDNHGRNTAFLRDDNRIWLSPIYDFAPMRADPEGIIRTTTWAKNGDNLQEFAGEYRFDKIADGLSDLIEPD
ILLRELRMLAAQLVDLKSRLTKRGVPKSILDFPAIGFDYLPEKLQRWGLV
Download Length: 1113 bp
Antitoxin
Download Length: 110 a.a. Molecular weight: 12320.45 Da Isoelectric Point: 10.8292
>AT256701 WP_005613259.1 NZ_CP103810:c1944219-1943890 [Actinobacillus equuli subsp. haemolyticus]
MTIQHKNASPTRSKVNGIERQLIRETIIVQLLKGEISQGQALRRLRVEALGINQQDYLKLAKVSRQTLSNIENDKGNYSI
ETINQVFKPMGLKLGLMPISKDLMASFLK
MTIQHKNASPTRSKVNGIERQLIRETIIVQLLKGEISQGQALRRLRVEALGINQQDYLKLAKVSRQTLSNIENDKGNYSI
ETINQVFKPMGLKLGLMPISKDLMASFLK
Download Length: 330 bp
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|