Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) hipBA/HipA-HipB
Location 2709777..2711365 Replicon chromosome
Accession NZ_CP103560
Organism Klebsiella pneumoniae strain 5165

Toxin (Protein)


Gene name hipA Uniprot ID A0A9J6RYF8
Locus tag M5R31_RS13245 Protein ID WP_004892016.1
Coordinates 2709777..2711099 (-) Length 441 a.a.

Antitoxin (Protein)


Gene name hipB Uniprot ID -
Locus tag M5R31_RS13250 Protein ID WP_004176198.1
Coordinates 2711099..2711365 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M5R31_RS13230 (2704833) 2704833..2707334 + 2502 WP_032435337.1 fimbria/pilus outer membrane usher protein -
M5R31_RS13235 (2707322) 2707322..2708326 + 1005 WP_032435338.1 fimbrial protein -
M5R31_RS13240 (2708468) 2708468..2709760 + 1293 WP_002904794.1 glycoside hydrolase family 10 protein -
M5R31_RS13245 (2709777) 2709777..2711099 - 1323 WP_004892016.1 type II toxin-antitoxin system HipA family toxin Toxin
M5R31_RS13250 (2711099) 2711099..2711365 - 267 WP_004176198.1 type II toxin-antitoxin system antitoxin HipB Antitoxin
M5R31_RS13255 (2711752) 2711752..2712078 - 327 WP_004184023.1 hydroxyisourate hydrolase -
M5R31_RS13260 (2712075) 2712075..2712575 - 501 WP_032435339.1 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase -
M5R31_RS13265 (2712553) 2712553..2713932 - 1380 WP_004184021.1 nucleobase:cation symporter-2 family protein -
M5R31_RS13270 (2714278) 2714278..2715432 + 1155 WP_002904783.1 FAD-dependent urate hydroxylase HpxO -
M5R31_RS13275 (2715413) 2715413..2716336 - 924 WP_008804925.1 LysR family hpxDE operon transcriptional regulator HpxR -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

HipA-like, C-terminal

(149-402)

Antitoxin

Cro/C1-type helix-turn-helix domain

(13-65)


Sequences

Toxin        


Download         Length: 441 a.a.        Molecular weight: 49141.44 Da        Isoelectric Point: 7.5357

>T255548 WP_004892016.1 NZ_CP103560:c2711099-2709777 [Klebsiella pneumoniae]
MATLTTWMNNVRVGTLTRQANGAHSFRYDEEWLRSPRARPLSLSLPLQYGNITADAVYHYFDNLLPDSPQVRDRIVRRYQ
ARSKQPFDLLAEVGRDSVGAVTLLPPGEEAHLEGLRWQTLDEAQLTALLTAYQSDIPLGMITGQDDFRISVAGAQEKTAL
LRMGEQWCIPQGATPTTHIIKLPIGEIKQPNATLDLRESVDNEYLCLALARELGLAVPEAEIITTPRIRALAVTRFDRRW
AQEGRVLLRLPQEDLCQAFGLPSAMKYESDGGPGIAAIMTFLLGSSEALKDRYDFMKFMVFQWLTGATDGHAKNFSIYLL
PGGSYRLTPFYDIISAFPVLGGTGLHLRDLKLSMGLNATKGRKTEINAIYPRHFLATAKAVNFPREQMLAILQEFAGHVP
QAIESARRTLPADFSSHVWQAITENMLKLHARLQQGLQAL

Download         Length: 1323 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9936.36 Da        Isoelectric Point: 8.5912

>AT255548 WP_004176198.1 NZ_CP103560:c2711365-2711099 [Klebsiella pneumoniae]
MNSPQIYSPVQLANYLKLLRQQNHWTQDALARRIGIKQATLSNFENHPDKTTLTTLFKILQSLGVVMMLNAKAAETAPAP
DNNTDLDW

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References