255395

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type V Classification (family/domain) ghoTS/ghoT-GhoS
Location 4256607..4257104 Replicon chromosome
Accession NZ_CP103540
Organism Escherichia coli strain 5264

Toxin (Protein)


Gene name ghoT Uniprot ID L4JJG6
Locus tag M5S66_RS20665 Protein ID WP_001173343.1
Coordinates 4256607..4256780 (-) Length 58 a.a.

Antitoxin (Protein)


Gene name ghoS Uniprot ID L4JK92
Locus tag M5S66_RS20670 Protein ID WP_000398619.1
Coordinates 4256808..4257104 (-) Length 99 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M5S66_RS20655 (4253277) 4253277..4254734 + 1458 WP_000856829.1 dipeptide/tripeptide permease DtpC -
M5S66_RS20660 (4254971) 4254971..4256488 + 1518 WP_001295074.1 lysine--tRNA ligase -
M5S66_RS20665 (4256607) 4256607..4256780 - 174 WP_001173343.1 type V toxin-antitoxin system toxin GhoT Toxin
M5S66_RS20670 (4256808) 4256808..4257104 - 297 WP_000398619.1 type V toxin-antitoxin system endoribonuclease antitoxin GhoS Antitoxin
M5S66_RS20675 (4257331) 4257331..4257603 - 273 WP_000405651.1 GNAT family N-acetyltransferase -
M5S66_RS20680 (4257615) 4257615..4257845 - 231 WP_000371704.1 4Fe-4S mono-cluster protein YjdI -
M5S66_RS20685 (4258026) 4258026..4259657 + 1632 WP_001216477.1 sensor histidine kinase -
M5S66_RS20690 (4259654) 4259654..4260373 + 720 WP_000611288.1 two-component system response regulator DcuR -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin GhoT/OrtT

(4-57)

Antitoxin

Endoribonuclease antitoxin GhoS

(5-94)


Sequences

Toxin        


Download         Length: 58 a.a.        Molecular weight: 6555.06 Da        Isoelectric Point: 10.2288

>T255395 WP_001173343.1 NZ_CP103540:c4256780-4256607 [Escherichia coli]
MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF

Download         Length: 174 bp

Antitoxin


Download         Length: 99 a.a.        Molecular weight: 11467.97 Da        Isoelectric Point: 4.1705

>AT255395 WP_000398619.1 NZ_CP103540:c4257104-4256808 [Escherichia coli]
MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDI
DFDLNIMTVDDYFRQFYK

Download         Length: 297 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A7U9QI41

Antitoxin

Source ID Structure
AlphaFold DB A0A7U9QBH6

References