Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 1710442..1711058 Replicon chromosome
Accession NC_015848
Organism Mycobacterium canettii CIPT 140010059

Toxin (Protein)


Gene name mazF Uniprot ID G0TJ74
Locus tag MCAN_RS07960 Protein ID WP_003407593.1
Coordinates 1710741..1711058 (+) Length 106 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G0TJ73
Locus tag MCAN_RS07955 Protein ID WP_003900349.1
Coordinates 1710442..1710744 (+) Length 101 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MCAN_RS07945 1706328..1708175 + 1848 WP_003407585.1 methylmalonyl-CoA mutase small subunit -
MCAN_RS07950 1708176..1710428 + 2253 WP_003407587.1 methylmalonyl-CoA mutase -
MCAN_RS07955 1710442..1710744 + 303 WP_003900349.1 type II toxin-antitoxin system antitoxin MazE4 Antitoxin
MCAN_RS07960 1710741..1711058 + 318 WP_003407593.1 type II toxin-antitoxin system toxin endoribonuclease MazF4 Toxin
MCAN_RS07965 1711055..1712059 + 1005 WP_003407596.1 methylmalonyl Co-A mutase-associated GTPase MeaB -
MCAN_RS07970 1712112..1713401 + 1290 WP_014000797.1 serine hydrolase -
MCAN_RS07975 1713474..1714247 - 774 WP_145974169.1 class I SAM-dependent methyltransferase -
MCAN_RS07980 1714305..1714517 - 213 WP_003898900.1 dodecin family protein -
MCAN_RS22795 1714527..1714751 - 225 WP_160522526.1 NUDIX domain-containing protein -
MCAN_RS07990 1715021..1716049 + 1029 WP_003407612.1 glycosyltransferase family 2 protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(6-99)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 106 a.a.        Molecular weight: 11377.97 Da        Isoelectric Point: 7.9950

>T25527 WP_003407593.1 NC_015848:1710741-1711058 [Mycobacterium canettii CIPT 140010059]
VNAPLRGQVYRCDLGYGAKPWLIVSNNARNRHTADVVAVRLTTTRRTIPTWVAMGPSDPLTGYVNADNIETLGKDELGDY
LGEVTPATMNKINTALATALGLPWP

Download         Length: 318 bp

>T25527 NC_015848:1710741-1711058 [Mycobacterium canettii CIPT 140010059]
GTGAACGCGCCGTTGCGTGGTCAGGTCTATCGATGCGACCTCGGATACGGGGCCAAACCGTGGCTCATCGTCTCCAACAA
CGCCCGCAACCGTCACACCGCCGACGTGGTGGCTGTGCGCCTGACAACAACGCGGAGAACCATACCGACCTGGGTCGCCA
TGGGCCCCAGCGATCCATTGACCGGATACGTCAACGCGGACAACATCGAGACCCTCGGCAAAGACGAGCTCGGTGACTAC
CTCGGTGAGGTCACGCCGGCGACGATGAACAAAATCAACACGGCGCTCGCGACCGCGCTGGGGCTACCGTGGCCATGA

Antitoxin


Download         Length: 101 a.a.        Molecular weight: 11173.42 Da        Isoelectric Point: 9.5564

>AT25527 WP_003900349.1 NC_015848:1710442-1710744 [Mycobacterium canettii CIPT 140010059]
VPFLVALSGIISGVRDHSMTVRLDQQTRQRLQDIVKGGYRSANAAIVDAINKRWEALHDEQLDAAYAAAIHDNPAYPYES
EAERSAARARRNARQQRSAQ

Download         Length: 303 bp

>AT25527 NC_015848:1710442-1710744 [Mycobacterium canettii CIPT 140010059]
GTGCCGTTTCTGGTTGCATTATCCGGTATCATCTCGGGCGTGCGTGATCATTCGATGACCGTGCGGCTCGACCAGCAAAC
TCGCCAGCGCCTGCAAGACATTGTGAAAGGCGGATACCGGAGCGCTAATGCGGCGATCGTCGACGCCATCAACAAGCGCT
GGGAGGCGCTACACGATGAGCAACTCGACGCCGCCTACGCGGCCGCGATCCATGACAATCCGGCGTACCCGTACGAGTCT
GAGGCCGAACGGAGCGCCGCGCGGGCCCGGCGCAACGCCAGGCAGCAGCGCTCGGCACAGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 5XE3
PDB 5XE2

Antitoxin

Source ID Structure
PDB 5XE3
AlphaFold DB G0TJ73

References