255203

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) kacAT/DUF1778(antitoxin)
Location 4678441..4679251 Replicon chromosome
Accession NZ_CP103503
Organism Klebsiella pneumoniae strain 5547

Toxin (Protein)


Gene name KacT Uniprot ID A0A060VJ83
Locus tag M5R16_RS23040 Protein ID WP_004178461.1
Coordinates 4678441..4678974 (-) Length 178 a.a.

Antitoxin (Protein)


Gene name KacA Uniprot ID J2E9Q7
Locus tag M5R16_RS23045 Protein ID WP_002887278.1
Coordinates 4678985..4679251 (-) Length 89 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M5R16_RS23035 (4677272) 4677272..4678393 + 1122 WP_002887282.1 cupin domain-containing protein -
M5R16_RS23040 (4678441) 4678441..4678974 - 534 WP_004178461.1 type II toxin-antitoxin system toxin KacT Toxin
M5R16_RS23045 (4678985) 4678985..4679251 - 267 WP_002887278.1 type II toxin-antitoxin system antitoxin KacA Antitoxin
M5R16_RS23050 (4679354) 4679354..4680787 - 1434 WP_004178459.1 Cu(+)/Ag(+) sensor histidine kinase -
M5R16_RS23055 (4680777) 4680777..4681460 - 684 WP_002887273.1 copper response regulator transcription factor CusR -
M5R16_RS23060 (4681632) 4681632..4683017 + 1386 WP_004178457.1 efflux transporter outer membrane subunit -
M5R16_RS23065 (4683035) 4683035..4683379 + 345 WP_004197273.1 cation efflux system protein CusF -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(91-151)

Antitoxin

Vibrio phage ICP1, Orf50

(2-86)


Sequences

Toxin        


Download         Length: 178 a.a.        Molecular weight: 19810.65 Da        Isoelectric Point: 5.2614

>T255203 WP_004178461.1 NZ_CP103503:c4678974-4678441 [Klebsiella pneumoniae]
MEQQLTIEMIADAFSYDITGFDCGEEALNTFLKEHLKRQHDGQILRGYALVSGDTVPRLLGYYTLSGSCFERGMLPSKTQ
QKKIPYQNAPSVTLGRLAIDKSVQGQGWGEMLVAHAMRVVWGASKAVGIYGLFVEALNEKAKAFYLRLGFIQLVDENSNL
LFYPTKSIEQLFTDDES

Download         Length: 534 bp

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9996.46 Da        Isoelectric Point: 10.1757

>AT255203 WP_002887278.1 NZ_CP103503:c4679251-4678985 [Klebsiella pneumoniae]
MPALKKQRIDLRLTDDDKSIIEEAAAISNQTITQFVVASASERAAEVIEQHRRMVLNEQSWSLVMEAITQPPAPNDRLKR
AAKRLQTR

Download         Length: 267 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A060VJ83

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GLZ1

References