254895

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YefM-YoeB
Location 3609707..3610269 Replicon chromosome
Accession NZ_CP103300
Organism Endozoicomonas euniceicola strain EF212

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag NX720_RS14690 Protein ID WP_262595556.1
Coordinates 3609707..3610018 (+) Length 104 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag NX720_RS14695 Protein ID WP_262595557.1
Coordinates 3610015..3610269 (+) Length 85 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NX720_RS14670 (NX720_14670) 3604979..3606514 - 1536 WP_262595552.1 alanine/glycine:cation symporter family protein -
NX720_RS14675 (NX720_14675) 3606863..3608296 + 1434 WP_262595553.1 carbon starvation protein A -
NX720_RS14680 (NX720_14680) 3608423..3609328 + 906 WP_262595554.1 methyltransferase domain-containing protein -
NX720_RS14685 (NX720_14685) 3609478..3609621 - 144 WP_262595555.1 hypothetical protein -
NX720_RS14690 (NX720_14690) 3609707..3610018 + 312 WP_262595556.1 type II toxin-antitoxin system prevent-host-death family antitoxin Toxin
NX720_RS14695 (NX720_14695) 3610015..3610269 + 255 WP_262595557.1 Txe/YoeB family addiction module toxin Antitoxin
NX720_RS14705 (NX720_14705) 3610767..3611534 - 768 WP_262595558.1 type II secretion system protein N -
NX720_RS14710 (NX720_14710) 3611531..3612052 - 522 WP_262595559.1 type II secretion system protein M -
NX720_RS14715 (NX720_14715) 3612049..3613281 - 1233 WP_262595560.1 type II secretion system protein GspL -
NX720_RS14720 (NX720_14720) 3613278..3614261 - 984 WP_262595561.1 type II secretion system minor pseudopilin GspK -
NX720_RS14725 (NX720_14725) 3614261..3614884 - 624 WP_262595562.1 type II secretion system minor pseudopilin GspJ -
NX720_RS14730 (NX720_14730) 3614893..3615258 - 366 WP_262595563.1 type II secretion system minor pseudopilin GspI -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(20-92)

Antitoxin

Toxin YoeB

(5-84)


Sequences

Toxin        


Download         Length: 104 a.a.        Molecular weight: 11785.38 Da        Isoelectric Point: 6.9776

>T254895 WP_262595556.1 NZ_CP103300:3609707-3610018 [Endozoicomonas euniceicola]
MQLKKRVRLTCAHNMEIHLMDVMTYSDFRSNLARTIDRVNDNHKPVLVTRQNGKPAVLMSVEDYNAFQETAYLMASPKNA
QRLSEAIHQIESGQSTDHGLIDE

Download         Length: 312 bp

Antitoxin


Download         Length: 85 a.a.        Molecular weight: 10353.83 Da        Isoelectric Point: 10.1306

>AT254895 WP_262595557.1 NZ_CP103300:3610015-3610269 [Endozoicomonas euniceicola]
MILSWADTAWSDYLYWQDTHKKVVKRINTLIRDIQRQPFTGLGDPEPLKHNWSRYWSRRINREHRLVYKVTDSAIFIAQC
RYHY

Download         Length: 255 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References