Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relE-yefM/Txe-RelB |
| Location | 2475867..2476390 | Replicon | chromosome |
| Accession | NZ_CP102966 | ||
| Organism | Staphylococcus aureus strain 29-P-01 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | NW955_RS12245 | Protein ID | WP_258412665.1 |
| Coordinates | 2475867..2476133 (-) | Length | 89 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | A0A2S6D1W5 |
| Locus tag | NW955_RS12250 | Protein ID | WP_000587617.1 |
| Coordinates | 2476133..2476390 (-) | Length | 86 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW955_RS12225 (NW955_12225) | 2471172..2472359 | - | 1188 | WP_000026189.1 | MFS transporter | - |
| NW955_RS12230 (NW955_12230) | 2472755..2473531 | - | 777 | WP_000072147.1 | iron export ABC transporter permease subunit FetB | - |
| NW955_RS12235 (NW955_12235) | 2473524..2474186 | - | 663 | WP_000923526.1 | ATP-binding cassette domain-containing protein | - |
| NW955_RS12240 (NW955_12240) | 2474434..2475510 | - | 1077 | WP_001076673.1 | M42 family metallopeptidase | - |
| NW955_RS12245 (NW955_12245) | 2475867..2476133 | - | 267 | WP_258412665.1 | Txe/YoeB family addiction module toxin | Toxin |
| NW955_RS12250 (NW955_12250) | 2476133..2476390 | - | 258 | WP_000587617.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| NW955_RS12255 (NW955_12255) | 2476750..2477205 | + | 456 | WP_000732076.1 | DUF1307 domain-containing protein | - |
| NW955_RS12260 (NW955_12260) | 2477373..2478950 | - | 1578 | WP_000143494.1 | FMN-binding glutamate synthase family protein | - |
| NW955_RS12265 (NW955_12265) | 2479145..2479894 | + | 750 | WP_000072462.1 | CPBP family lipoprotein N-acylation protein LnsB | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|