Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relE-yefM/Txe-RelB |
| Location | 2433859..2434382 | Replicon | chromosome |
| Accession | NZ_CP102957 | ||
| Organism | Staphylococcus aureus strain 18-H-62 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | NW959_RS11940 | Protein ID | WP_258411852.1 |
| Coordinates | 2433859..2434125 (-) | Length | 89 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | A0A2S6D1W5 |
| Locus tag | NW959_RS11945 | Protein ID | WP_000587617.1 |
| Coordinates | 2434125..2434382 (-) | Length | 86 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW959_RS11920 (NW959_11920) | 2429165..2430352 | - | 1188 | WP_000026189.1 | MFS transporter | - |
| NW959_RS11925 (NW959_11925) | 2430748..2431524 | - | 777 | WP_000072151.1 | iron export ABC transporter permease subunit FetB | - |
| NW959_RS11930 (NW959_11930) | 2431517..2432179 | - | 663 | WP_000923523.1 | ATP-binding cassette domain-containing protein | - |
| NW959_RS11935 (NW959_11935) | 2432427..2433503 | - | 1077 | WP_258411851.1 | M42 family metallopeptidase | - |
| NW959_RS11940 (NW959_11940) | 2433859..2434125 | - | 267 | WP_258411852.1 | Txe/YoeB family addiction module toxin | Toxin |
| NW959_RS11945 (NW959_11945) | 2434125..2434382 | - | 258 | WP_000587617.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| NW959_RS11950 (NW959_11950) | 2434741..2435196 | + | 456 | WP_000732082.1 | DUF1307 domain-containing protein | - |
| NW959_RS11955 (NW959_11955) | 2435364..2436941 | - | 1578 | WP_258411853.1 | FMN-binding glutamate synthase family protein | - |
| NW959_RS11960 (NW959_11960) | 2437138..2437887 | + | 750 | WP_006191031.1 | CPBP family lipoprotein N-acylation protein LnsB | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|