Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 450569..451222 Replicon chromosome
Accession NZ_CP102831
Organism Acinetobacter baumannii strain AB3927

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag NV385_RS02195 Protein ID WP_000607077.1
Coordinates 450833..451222 (+) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag NV385_RS02190 Protein ID WP_001288210.1
Coordinates 450569..450826 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NV385_RS02170 (NV385_02170) 446085..447092 + 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -
NV385_RS02175 (NV385_02175) 447111..447488 + 378 WP_001216380.1 50S ribosomal protein L17 -
NV385_RS02180 (NV385_02180) 447670..449160 + 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
NV385_RS02185 (NV385_02185) 449209..450381 - 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
NV385_RS02190 (NV385_02190) 450569..450826 + 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
NV385_RS02195 (NV385_02195) 450833..451222 + 390 WP_000607077.1 membrane protein Toxin
NV385_RS02200 (NV385_02200) 451992..453077 + 1086 WP_000049106.1 hypothetical protein -
NV385_RS02205 (NV385_02205) 453155..453721 + 567 WP_000651538.1 rhombosortase -
NV385_RS02210 (NV385_02210) 453909..456104 + 2196 WP_001158906.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T254217 WP_000607077.1 NZ_CP102831:450833-451222 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT254217 WP_001288210.1 NZ_CP102831:450569-450826 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References