Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | BrnTA/BrnT-BrnA |
Location | 3861..4449 | Replicon | plasmid unnamed4 |
Accession | NZ_CP102819 | ||
Organism | Acinetobacter baumannii strain AB176-VUB |
Toxin (Protein)
Gene name | brnT | Uniprot ID | A0A3G6Z3M6 |
Locus tag | L2Z12_RS19475 | Protein ID | WP_000438826.1 |
Coordinates | 3861..4148 (+) | Length | 96 a.a. |
Antitoxin (Protein)
Gene name | brnA | Uniprot ID | N9M5I3 |
Locus tag | L2Z12_RS19480 | Protein ID | WP_001983304.1 |
Coordinates | 4135..4449 (+) | Length | 105 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
L2Z12_RS19450 (L2Z12_19470) | 1..951 | + | 951 | WP_001205343.1 | replication initiation protein RepM | - |
L2Z12_RS19455 (L2Z12_19475) | 944..1519 | + | 576 | WP_001096616.1 | plasmid replication DNA-binding protein | - |
L2Z12_RS19460 (L2Z12_19480) | 1539..1682 | + | 144 | WP_001125246.1 | hypothetical protein | - |
L2Z12_RS19465 (L2Z12_19485) | 1865..2692 | - | 828 | WP_000713530.1 | OXA-24 family carbapenem-hydrolyzing class D beta-lactamase OXA-72 | - |
L2Z12_RS19470 (L2Z12_19490) | 2844..3590 | + | 747 | WP_005262957.1 | IS5-like element ISAba31 family transposase | - |
L2Z12_RS19475 (L2Z12_19495) | 3861..4148 | + | 288 | WP_000438826.1 | BrnT family toxin | Toxin |
L2Z12_RS19480 (L2Z12_19500) | 4135..4449 | + | 315 | WP_001983304.1 | BrnA antitoxin family protein | Antitoxin |
L2Z12_RS19485 (L2Z12_19505) | 4577..6988 | + | 2412 | WP_000932953.1 | TonB-dependent receptor ZnuD2 | - |
L2Z12_RS19490 (L2Z12_19510) | 7293..7754 | + | 462 | WP_000761346.1 | DIP1984 family protein | - |
L2Z12_RS19495 (L2Z12_19515) | 8077..8250 | - | 174 | WP_001282484.1 | hypothetical protein | - |
L2Z12_RS19500 (L2Z12_19520) | 8250..8621 | - | 372 | WP_000504218.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | blaOXA-72 | - | 1..9830 | 9830 | |
- | flank | IS/Tn | blaOXA-72 | - | 1865..3590 | 1725 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A3G6Z3M6 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | N9M5I3 |