Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 445537..445919 Replicon chromosome
Accession NZ_CP102592
Organism Xanthomonas sp. CFBP 8443

Toxin (Protein)


Gene name EcnB Uniprot ID -
Locus tag NUG20_RS01775 Protein ID WP_263111362.1
Coordinates 445785..445919 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID -
Locus tag NUG20_RS01770 Protein ID WP_263111363.1
Coordinates 445537..445689 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NUG20_RS01740 (NUG20_01740) 441060..441326 - 267 WP_263396752.1 hypothetical protein -
NUG20_RS01745 (NUG20_01745) 441489..442454 + 966 WP_263396753.1 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA -
NUG20_RS01750 (NUG20_01750) 442451..443191 + 741 WP_263396754.1 type III pantothenate kinase -
NUG20_RS01755 (NUG20_01755) 443201..444052 + 852 WP_263396755.1 SPOR domain-containing protein -
NUG20_RS01765 (NUG20_01765) 444467..445390 + 924 WP_263396756.1 arginase -
NUG20_RS01770 (NUG20_01770) 445537..445689 + 153 WP_263111363.1 entericidin A/B family lipoprotein Antitoxin
NUG20_RS01775 (NUG20_01775) 445785..445919 + 135 WP_263111362.1 entericidin A/B family lipoprotein Toxin
NUG20_RS01780 (NUG20_01780) 446115..446330 + 216 WP_263396757.1 CsbD family protein -
NUG20_RS01785 (NUG20_01785) 446407..447240 - 834 WP_263396758.1 hypothetical protein -
NUG20_RS01790 (NUG20_01790) 447349..448641 + 1293 WP_263396759.1 tryptophan--tRNA ligase -
NUG20_RS01795 (NUG20_01795) 448927..449850 + 924 WP_263396760.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4604.35 Da        Isoelectric Point: 7.9930

>T253872 WP_263111362.1 NZ_CP102592:445785-445919 [Xanthomonas sp. CFBP 8443]
MKRTFAWMLLAMFSVGLLSGCNTVAGAGKDVQSAGEKVEDAAKN

Download         Length: 135 bp

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5275.30 Da        Isoelectric Point: 7.5954

>AT253872 WP_263111363.1 NZ_CP102592:445537-445689 [Xanthomonas sp. CFBP 8443]
MKRLLTLMMLTLFCAGMLTGCNTMAGAGKDMQKAGEKVEDKAGDCSDGKC

Download         Length: 153 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References