Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 461402..462055 Replicon chromosome
Accession NZ_CP102580
Organism Acinetobacter baumannii strain A9844

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag NUX13_RS02240 Protein ID WP_000607077.1
Coordinates 461666..462055 (+) Length 130 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID V5V966
Locus tag NUX13_RS02235 Protein ID WP_001288210.1
Coordinates 461402..461659 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NUX13_RS02215 (NUX13_02215) 456918..457925 + 1008 WP_000198631.1 DNA-directed RNA polymerase subunit alpha -
NUX13_RS02220 (NUX13_02220) 457944..458321 + 378 WP_001216380.1 50S ribosomal protein L17 -
NUX13_RS02225 (NUX13_02225) 458503..459993 + 1491 WP_000415125.1 NAD(P)/FAD-dependent oxidoreductase -
NUX13_RS02230 (NUX13_02230) 460042..461214 - 1173 WP_001190542.1 acyl-CoA dehydrogenase family protein -
NUX13_RS02235 (NUX13_02235) 461402..461659 + 258 WP_001288210.1 succinate dehydrogenase assembly factor 2 Antitoxin
NUX13_RS02240 (NUX13_02240) 461666..462055 + 390 WP_000607077.1 membrane protein Toxin
NUX13_RS02245 (NUX13_02245) 462825..463910 + 1086 WP_000049106.1 hypothetical protein -
NUX13_RS02250 (NUX13_02250) 463988..464554 + 567 WP_000651538.1 rhombosortase -
NUX13_RS02255 (NUX13_02255) 464742..466937 + 2196 WP_001158906.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 130 a.a.        Molecular weight: 15552.88 Da        Isoelectric Point: 10.4313

>T253866 WP_000607077.1 NZ_CP102580:461666-462055 [Acinetobacter baumannii]
MINHLNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAYLDKKLWSLAYKSQNTV
SRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKTLEKLY

Download         Length: 390 bp

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10318.77 Da        Isoelectric Point: 4.6150

>AT253866 WP_001288210.1 NZ_CP102580:461402-461659 [Acinetobacter baumannii]
MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDWFMEVSEPPRTELRDFIYKLK
HYVHG

Download         Length: 258 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4BQM7

References